Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1359
(799 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_49286| Best HMM Match : Laminin_N (HMM E-Value=0) 46 4e-05
SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0) 44 1e-04
SB_12645| Best HMM Match : Laminin_EGF (HMM E-Value=3e-31) 43 3e-04
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 41 0.001
SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0) 41 0.001
SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0) 41 0.001
SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0) 40 0.002
SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0) 40 0.002
SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_7767| Best HMM Match : Laminin_EGF (HMM E-Value=3.4e-05) 40 0.003
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 40 0.003
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 39 0.005
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0) 37 0.016
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_40564| Best HMM Match : Laminin_EGF (HMM E-Value=3.5e-12) 36 0.050
SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.088
SB_5993| Best HMM Match : EGF_2 (HMM E-Value=9e-14) 35 0.088
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 34 0.12
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 34 0.15
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23) 33 0.20
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 32 0.47
SB_33149| Best HMM Match : DSL (HMM E-Value=5.60519e-45) 31 0.82
SB_22868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 31 1.4
SB_15312| Best HMM Match : EGF (HMM E-Value=7.1e-21) 31 1.4
SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0) 30 1.9
SB_49120| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-08) 30 1.9
SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_45586| Best HMM Match : EGF_2 (HMM E-Value=0.00035) 30 1.9
SB_29838| Best HMM Match : EGF (HMM E-Value=1.2e-15) 30 2.5
SB_48904| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 3.3
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 29 3.3
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 29 3.3
SB_16291| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-11) 29 3.3
SB_7527| Best HMM Match : DSL (HMM E-Value=2.5e-34) 29 3.3
SB_3772| Best HMM Match : EGF (HMM E-Value=6.3e-06) 29 3.3
SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_33072| Best HMM Match : Arm (HMM E-Value=0.00043) 29 4.4
SB_25361| Best HMM Match : Cadherin (HMM E-Value=0) 29 4.4
SB_4732| Best HMM Match : EGF (HMM E-Value=2.4e-10) 29 4.4
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 29 4.4
SB_18365| Best HMM Match : EGF (HMM E-Value=0.00021) 29 4.4
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 29 4.4
SB_58129| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 29 5.8
SB_28917| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_49545| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_40116| Best HMM Match : EGF (HMM E-Value=0) 28 7.6
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 28 7.6
SB_2045| Best HMM Match : EGF (HMM E-Value=0) 28 7.6
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 49.6 bits (113), Expect = 3e-06
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
S CNC+ S+ CN+TG C+C P + G +CDRC
Sbjct: 823 SPCNCDASGSLATNCNSTGYCQCKPNIGGRRCDRC 857
Score = 46.4 bits (105), Expect = 3e-05
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -3
Query: 701 SFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDRCPE 585
S CNCN S+ C+ +G+C C P V G+KCD C +
Sbjct: 867 SCKPCNCNMAGSLSDTCDDSGKCNCKPNVQGDKCDTCKD 905
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = -3
Query: 689 CNCNT-GYSVGFM--CNAT-GQCECLPGVIGEKCDRC 591
CNC+T G G + C+ T GQC C V G+ CDRC
Sbjct: 661 CNCSTIGAKPGLVNTCDKTNGQCYCKTYVEGKTCDRC 697
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -3
Query: 689 CNCNTGYSVG--FMCNAT-GQCECLPGVIGEKCDRC 591
C CNT +V C+ + GQC C V G CD C
Sbjct: 559 CGCNTAGTVNRNASCDQSRGQCYCKSNVTGRTCDTC 594
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 689 CNCNT-GYSVGFMCNA-TGQCECLPGVIGEKCDRCPE 585
C C+ G G +C+A +GQC C G G +C C +
Sbjct: 612 CECDPFGTLPGSVCDAGSGQCRCKAGSTGLRCHLCED 648
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 9/42 (21%)
Frame = -3
Query: 689 CNCNTGYSVG--------FMCNAT-GQCECLPGVIGEKCDRC 591
CNCN ++G C+ + G+C CL V G +CD+C
Sbjct: 768 CNCNPKGTLGGDRTPAGELECSGSNGKCACLTNVQGLRCDQC 809
>SB_49286| Best HMM Match : Laminin_N (HMM E-Value=0)
Length = 1465
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 758 VMLILYIYTKCRTEKNVKCSFSDCNCNTGYSVGFMCNAT-GQCECLPGVIGEKCDRC 591
+++I+ I C K + CNC+T S C+ T GQC C PGV G +CD+C
Sbjct: 1014 IIIIILIIIVCFPPKGCE----PCNCDTTGSWNNTCSVTTGQCHCKPGVTGRRCDQC 1066
Score = 41.1 bits (92), Expect = 0.001
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3
Query: 653 CNATGQCECLPGVIGEKCDRC 591
CN+ GQC C PGV G KCD+C
Sbjct: 384 CNSEGQCRCKPGVTGIKCDKC 404
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -3
Query: 659 FMCNATGQCECLPGVIGEKCDRC-PE 585
F C+ G+C CLP V G+KCD C PE
Sbjct: 885 FPCDDKGRCTCLPNVSGDKCDTCRPE 910
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 653 CNATGQCECLPGVIGEKCDRC 591
CN G+C C V+G KC C
Sbjct: 433 CNEKGECTCKRHVVGAKCTLC 453
>SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCN-ATGQCECLPGVIGEKCDRC 591
CNC+ S G +CN +TGQC C GV+G CD+C
Sbjct: 387 CNCHPHGSRGRVCNQSTGQCPCKEGVVGRSCDKC 420
>SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -3
Query: 722 TEKNVKCSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
T + +C CN Y+ TGQC+C PGV G+ CDRC
Sbjct: 11 TLRKEECQPCACNKTGSYNSSTCDRETGQCKCKPGVAGQNCDRC 54
>SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1358
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRCPE 585
C CN SV C GQC C PGV G KCD+C +
Sbjct: 1100 CECNPDGSVNRTCQKYAGQCHCKPGVTGRKCDQCQQ 1135
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNAT-GQCECLPGVIGEKCDR 594
C C+ G S +CN T GQC+CLP + G +CDR
Sbjct: 891 CLCDYGGSSSPVCNKTDGQCKCLPNIDGRQCDR 923
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -3
Query: 746 LYIYTKCRTEKNVK-CSFSDCNCNTGYSVGFMC--NATGQCECLPGVIGEKCDRC 591
LY + R++ V C DC+ + +C +A GQC C V G +CD C
Sbjct: 819 LYYRPENRSQNAVDACELCDCDTAGARNSSNICEGDAYGQCPCKQNVQGLRCDTC 873
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -3
Query: 698 FSDCNCNTGYSVGFMCNATG---QCECLPGVIGEKCDRC 591
F C CN G G N+T QC C PG G CD C
Sbjct: 702 FGFCACN-GQGTGCKFNSTVGDFQCVCQPGSCGYYCDEC 739
>SB_12645| Best HMM Match : Laminin_EGF (HMM E-Value=3e-31)
Length = 541
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATGQCECLPGVIGEKCDRCPE 585
CNC+ Y+ G + G CEC P G +CDRC E
Sbjct: 484 CNCDPQYTTGRCYDENGDCECKPRYGGPRCDRCRE 518
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 692 DCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRC 591
DC C S+G CN TGQC C PG G +C+RC
Sbjct: 1276 DCECAEA-SLGQSCNVRTGQCLCKPGATGRRCERC 1309
Score = 39.1 bits (87), Expect = 0.004
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
C+C+ G +C++TG+C C GV G +CD C
Sbjct: 775 CDCDARGVNGSVCDSTGRCLCKAGVTGIRCDTC 807
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATG-QCECLPGVIGEKCDRC 591
C C+T ++ C G QC+C P VIG +C+RC
Sbjct: 639 CECDTKGALSDECQEFGGQCQCRPYVIGRQCNRC 672
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDR 594
S C C+ G S C++ TGQC+C P V G C R
Sbjct: 81 SGCACDVGGSFDQKCDSITGQCKCRPNVRGRDCSR 115
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -3
Query: 692 DCNCNT-GYSVG-FMCNA-TGQCECLPGVIGEKCDRC 591
DC C+ G + G CN TGQC C P G +CD+C
Sbjct: 726 DCKCDRFGVAGGNIACNPKTGQCPCKPSHTGRRCDQC 762
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNAT-GQCECLPGVIGEKCDRC 591
C C+ +V +CN T G C+C VIG C C
Sbjct: 1228 CECSACGAVTSVCNHTNGACQCKANVIGPNCSTC 1261
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 11/44 (25%)
Frame = -3
Query: 689 CN-CNTGYSVGF---------MCNA-TGQCECLPGVIGEKCDRC 591
CN C TGY GF CN TG C+C P +G C+ C
Sbjct: 669 CNRCKTGY-YGFPNCKKCQCVFCNEETGACDCPPNTVGLNCELC 711
>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 587
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
CNC+T S+ C + GQC+C G KCD+C
Sbjct: 433 CNCDTRGSLSTFCGSWGQCQCRMNFEGLKCDQC 465
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
C C+ SV C+ TG C C G G KCDRC
Sbjct: 387 CECSPVGSVSPDCDVTGHCTCTRGFGGRKCDRC 419
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATG-QCECLPGVIGEKCDRC 591
C C+ ++ C+ G QC C V+G KCDRC
Sbjct: 341 CECDPKGALDASCSKFGGQCTCRRNVVGRKCDRC 374
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -3
Query: 689 CNCNTGYSVGFM--CNAT-GQCECLPGVIGEKCDRCPE 585
C CN ++G + C+ G+C C V G +C RC +
Sbjct: 535 CGCNLNGTLGSIGDCDKDHGRCNCKAHVTGRECGRCAD 572
>SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 546
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCN-ATGQCECLPGVIGEKCDRCP 588
CNCN + +C+ +TG+C C + G+KCD CP
Sbjct: 2 CNCNPEGATNLVCDQSTGRCPCRTRIRGKKCDLCP 36
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCN-ATGQCECLPGVIGEKCDRC 591
CNCN S C+ A+G+C C VIG KCD C
Sbjct: 155 CNCNVQGSESQSCDQASGKCTCKKNVIGWKCDMC 188
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNC-NTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
C C N+G+ C G+C C PG G C+ C
Sbjct: 93 CACSNSGFGT---CGQYGECICRPGYTGRSCESC 123
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
C+C+ + +C+ TG C C G +C +C
Sbjct: 48 CDCDPLTTKDEICDNTGSCVCKDNFQGHRCQKC 80
>SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 683
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 707 KCSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
+C DCN N G S + TGQC C V+G C RC
Sbjct: 149 QCKACDCNVN-GSSSSLCDHVTGQCSCKENVVGRDCSRC 186
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -3
Query: 707 KCSFSDCNCNTGYSV-GFMC--NATGQCECLPGVIGEKCDRC 591
K + C+CN +V G +C + GQC+C GV G CD+C
Sbjct: 242 KMTCKACDCNVDGTVNGTVCANDTIGQCQCKSGVTGRACDKC 283
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
++C CN S C+ +G C C VIG KC +C
Sbjct: 199 TECACNVHGSASLQCDDSGVCPCNLEVIGTKCAQC 233
Score = 31.5 bits (68), Expect = 0.82
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 641 GQCECLPGVIGEKCDRC 591
GQC C PGV G C RC
Sbjct: 46 GQCRCKPGVEGRDCGRC 62
>SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1101
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -3
Query: 692 DCNC-NTGYSVGFMCN-ATGQCECLPGVIGEKCDRCPE 585
DCNC G + CN TGQCEC V G +CD C +
Sbjct: 376 DCNCFPQGITNNGTCNQTTGQCECRANVTGRQCDSCAD 413
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRC 591
C+C + S +CNA +GQC C PGVI C RC
Sbjct: 778 CDCVSTGSHHLVCNAVSGQCPCKPGVITRTCSRC 811
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRC 591
CNC+ G S CN TG C C +GEKC+ C
Sbjct: 875 CNCHEGGSQSQQCNLQTGICTCKSNALGEKCESC 908
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNAT-----GQCECLPGVIGEKCDRC 591
C C+ SVG N+T G+C+C PGV G CD+C
Sbjct: 729 CGCD---SVGTYLNSTCDRYGGKCQCKPGVTGRTCDKC 763
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 689 CNCNTGYSVGFMCN-ATGQCECLPGVIGEKC 600
C+C+ G SV +CN TG C C +IG +C
Sbjct: 482 CDCDYGGSVLQICNKTTGSCMCRTNIIGTRC 512
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 692 DCNCNTGYSVGFMCN-ATGQCECLPGVIGEKCDRC 591
+C CN S C+ TG C C G KC C
Sbjct: 826 ECRCNMSGSADAQCDDVTGNCTCKNSTDGAKCAEC 860
>SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 205
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCN-ATGQCECLPGVIGEKCDRC 591
C+CN S +C+ TGQC C V+G C RC
Sbjct: 111 CDCNVNGSSSSLCDHVTGQCSCKANVVGRDCSRC 144
Score = 37.1 bits (82), Expect = 0.016
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
++C CN S C+ +G C C VIG KC +C
Sbjct: 157 TECACNVHGSASLQCDDSGVCPCNLEVIGTKCTQC 191
Score = 31.5 bits (68), Expect = 0.82
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 641 GQCECLPGVIGEKCDRC 591
GQC C PGV G C RC
Sbjct: 80 GQCRCKPGVEGRDCGRC 96
>SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -3
Query: 689 CNCN-TGYSVGFMCNATG-QCECLPGVIGEKCDRC 591
C CN TG +C+ G QC C P VIG KCD C
Sbjct: 696 CECNATGAVTPSVCDQCGGQCSCRPHVIGRKCDEC 730
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMC-NATGQCECLPGVIGEKCDRCPE 585
C CN YS C N TG C C GV G KC C +
Sbjct: 795 CGCNELYSRDLQCDNDTGVCSCKDGVGGAKCTECSD 830
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
S CNC+ S+ C+ G C C P G KCD
Sbjct: 434 SACNCDPAGSINVTCSDGGACHCRPHFSGLKCD 466
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRCPE 585
C C+ S+ +CN G C C IG CD CP+
Sbjct: 897 CQCDLNGSLNPVCNKLNGNCTCRSNAIGRLCDSCPD 932
Score = 35.5 bits (78), Expect = 0.050
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = -3
Query: 698 FSDCNCN-TGYSV---GFMCNA-TGQCECLPGVIGEKCDRCPE 585
F DC C TG CNA TG+C+C P V G CD C +
Sbjct: 294 FIDCACTLTGVRNMPNNTECNAVTGECDCKPNVQGRACDTCKD 336
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRC 591
C CN S C+ TG+CEC P + +C RC
Sbjct: 746 CACNMTGSKRSSCHPDTGKCECHPSITERQCSRC 779
>SB_7767| Best HMM Match : Laminin_EGF (HMM E-Value=3.4e-05)
Length = 52
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -3
Query: 689 CNC---NTGYSVGFMCNAT-GQCECLPGVIGEKCDRCPE 585
C+C NT Y +CNAT GQC C + G CDRC E
Sbjct: 2 CDCVLPNTLYGNSTVCNATTGQCTCKEKISGRTCDRCHE 40
>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
Length = 198
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNC-NTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
CNC + G G N TGQC+C P V G C+RC
Sbjct: 130 CNCTDRGSKHGVCNNVTGQCDCHPLVTGLSCERC 163
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDR-CP 588
S C C GY + TG CECLPG G++CD+ CP
Sbjct: 586 SKCQCLHGYCD----HVTGSCECLPGWTGKRCDQACP 618
Score = 34.7 bits (76), Expect = 0.088
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -3
Query: 695 SDCNCNTGYS-VGFMCN-ATGQCECLPGVIGEKC-DRCPE 585
S C C+ + V C+ TGQC C PG G +C ++CPE
Sbjct: 737 SSCRCDPSKTDVKKPCDHVTGQCNCRPGYRGPRCLEQCPE 776
Score = 32.7 bits (71), Expect = 0.35
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -3
Query: 647 ATGQCECLPGVIGEKCD-RCPE 585
A+G+C C PG G++C+ RCP+
Sbjct: 430 ASGRCACAPGFTGDRCESRCPK 451
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATGQCECLPGVIGEKC-DRCP 588
C C+ G + TG+C C+PG G C D CP
Sbjct: 183 CTCS---EYGSCDSRTGKCHCMPGYSGPTCIDECP 214
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -3
Query: 653 CNAT-GQCECLPGVIGEKCDR-CP 588
CNAT G C C G G CDR CP
Sbjct: 637 CNATDGSCNCAAGYHGNACDRPCP 660
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = -3
Query: 692 DCN--CNTGYSVGFMCNA-TGQCECLPGVIGEKC 600
+CN C Y CNA TG+C CL G G+ C
Sbjct: 538 NCNSPCPKCYHSNGACNAATGKCVCLDGYHGDSC 571
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -3
Query: 653 CNAT-GQCECLPGVIGEKCD-RCP 588
C AT G C CLPG G C CP
Sbjct: 795 CRATDGVCLCLPGYYGNSCQLMCP 818
>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1574
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDR 594
S+C C+ G S C+ TGQC C G+ G +C+R
Sbjct: 1516 SNCACDVGGSYDNQCDKQTGQCRCRKGITGRQCER 1550
Score = 35.5 bits (78), Expect = 0.050
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRC 591
C CN ++G CN TG+C C V GE CDRC
Sbjct: 1469 CGCNPLGTIG-ECNPDTGRCTCKRYVEGEDCDRC 1501
>SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1706
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 689 CNCNTGYSVGFMC-NATGQCECLPGVIGEKCDRC 591
C C+ S+ +C NA G+C+C V G KCD C
Sbjct: 787 CECSMSGSITPICDNADGKCQCKANVEGAKCDAC 820
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -3
Query: 704 CSFSDCNC-NTGYSVGFMCN-ATGQCECLPG--VIGEKCDRCPE 585
C DCN T YS +C+ TGQC C + G+ CDRC E
Sbjct: 1063 CKACDCNLPGTLYSNTSVCDQTTGQCSCNATLHIGGQLCDRCEE 1106
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 707 KCSFSDCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRC 591
+C +CN + + C+ TGQC C P + G CD C
Sbjct: 446 ECKACNCNISGTRNATINCDQLTGQCFCKPSIQGVYCDGC 485
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 689 CNCNT-GYSVGFMCNATG-QCECLPGVIGEKCDRC 591
C C+ G + C A G QC C PGV G KC+ C
Sbjct: 738 CECDPEGSTNPTQCVAYGGQCPCKPGVAGLKCNHC 772
Score = 32.3 bits (70), Expect = 0.47
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 641 GQCECLPGVIGEKCDRC 591
GQC C P V G +CD+C
Sbjct: 416 GQCSCKPNVYGRRCDQC 432
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -3
Query: 722 TEKNVKCSFSDCNCNTGYSVGFMCNA-TGQC-ECLPGVIGEKCDRC 591
T + + C +C+ N + C+A TG+C +CLP V GE C++C
Sbjct: 619 TGQYIICLMCNCSGNLDLTKPNSCDAVTGKCYKCLPNVTGEHCEKC 664
>SB_40564| Best HMM Match : Laminin_EGF (HMM E-Value=3.5e-12)
Length = 186
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 695 SDCNCNTG--YSVGFMCNATGQCECLPGVIGEKCD 597
S C C++G Y G ATGQC+C V G++C+
Sbjct: 151 SACECDSGGTYPAGTCNKATGQCQCRAHVTGKRCN 185
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 725 RTEKNVK-CSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
R KNV +F DC + + F A G C C V G +CD C
Sbjct: 47 RGAKNVTGVTFLDCVTDDNETALFPGKAPGDCFCKSHVQGRQCDTC 92
>SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 704 CSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDRC 591
C DCN + ++G TGQC C G C+RC
Sbjct: 130 CKACDCNGHGDVTLGVCDRMTGQCFCKDNTEGLNCERC 167
>SB_5993| Best HMM Match : EGF_2 (HMM E-Value=9e-14)
Length = 360
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -3
Query: 710 VKCSFSDCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDR-CPE 585
++C+ S C C + Y C+A TG+C C PG G +CD+ CP+
Sbjct: 267 IQCN-SKCTCASVY-----CHAQTGRCMCSPGKTGAECDQDCPQ 304
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 710 VKCSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD-RCP 588
V C C C G G +G CEC G G+KC RCP
Sbjct: 154 VNCEHK-CACLNG---GTCDRVSGCCECNSGWYGDKCQYRCP 191
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRCP 588
S C+C+ ++ CN TGQC+C G +C CP
Sbjct: 282 SACDCDRIGAIDNFCNILTGQCQCRNWASGRQCSLCP 318
Score = 33.9 bits (74), Expect = 0.15
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 641 GQCECLPGVIGEKCDRC 591
GQC+C VIG++CDRC
Sbjct: 253 GQCKCKSNVIGQRCDRC 269
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 728 CRTEKNVKCSFSDCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRCPE 585
C C DC C G S+ MC+ TGQC+C G G +C C +
Sbjct: 471 CNQVSGKGCQQCDC-CIEG-SLRSMCSQITGQCQCKAGFGGPRCCECED 517
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDRC 591
S CN N S C+ TG+C C G IG+K D C
Sbjct: 528 SACNGNPAGSGHLQCDRDTGKCLCKVGHIGDKWDMC 563
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 728 CRTEKNVKCSFSD--CNCNTGYSVGFMCNATGQCECLPGVIGEKCDR 594
C+ +KN C D C C G++ G CEC PG G KC++
Sbjct: 232 CKCQKNATCDKIDGTCQCKPGWT-GI------DCECSPGKYGNKCEK 271
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 704 CSFSDCNCNTGYSVGFMCNATGQ-CECLPGVIGEKCDR--CP 588
C D NCN GF CN Q CEC PG G+ CD+ CP
Sbjct: 1555 CPGRDGNCNGN---GF-CNLKLQKCECYPGWAGDACDKLDCP 1592
>SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23)
Length = 198
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -3
Query: 704 CSFSDCNC-NTGYSVGFMCN-ATGQCECLPG--VIGEKCDRCPE 585
C DCN T YS +C+ TGQC C + G+ CDRC E
Sbjct: 141 CKACDCNLPGTLYSNTSVCDQTTGQCSCNATLHIGGQLCDRCEE 184
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -3
Query: 713 NVKCSFSDCNCNTGYSV---GFMCNATGQCECLPGVIGEKC 600
N + SF+ C+CN GY++ G CN +C L G+ KC
Sbjct: 1217 NTEGSFT-CSCNPGYNLGSDGVTCNDVNECS-LTGICSHKC 1255
>SB_33149| Best HMM Match : DSL (HMM E-Value=5.60519e-45)
Length = 443
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 713 NVKCSFSDCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCD 597
NV CS N +TG+ + CNA TG ECL IGE+CD
Sbjct: 188 NVACS--PRNDSTGH---YNCNADTGAKECLESWIGEQCD 222
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 692 DCNCNTGYSVGFMCN-ATGQCECLPGVIGEKCD 597
DC S G+ CN TGQ C PG G C+
Sbjct: 156 DCRPRLDASAGYTCNETTGQKICYPGWYGRNCN 188
>SB_22868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 683 CNTGYSVGFMCNATG-QCECLPGVIGEKCD 597
C G + +C+ G +C C+PG GEKC+
Sbjct: 126 CANGGTCLELCDTGGYECSCVPGFFGEKCE 155
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -3
Query: 722 TEKNVKCSFSDCNCNTGYSVGFMCNATG---QCECLPGVIGEKCD 597
T KN + ++C+ N + G CN T +CEC G IG++C+
Sbjct: 2612 TGKNCELRKTNCSSNPCQNGG-TCNVTDTGYKCECFVGYIGKECE 2655
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATGQCECLPGVIGEKCDR 594
C C+ GY +G CN T CE P + G C +
Sbjct: 794 CECSAGY-LGKSCNMTDPCEPSPCLNGGSCTK 824
>SB_15312| Best HMM Match : EGF (HMM E-Value=7.1e-21)
Length = 77
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 743 YIYTKCRTEKNVKCSFSDC----NCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
Y T C T+ N +C+ S C CN G ++ C C+PG IG +C+
Sbjct: 31 YTGTHCETDIN-ECASSPCLNGATCNDGVNLF-------SCSCVPGYIGVRCE 75
>SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 908
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 737 YTKCRTEKNVKCSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
YT R E + CS+++ C+ G S + C C PG G+ C+
Sbjct: 182 YTGARCETRI-CSYNN-PCDNGGSCSVDGSGDYNCACRPGFTGKNCE 226
>SB_49120| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-08)
Length = 401
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 644 TGQCECLPGVIGEKCD 597
TG+C+C PG GE CD
Sbjct: 137 TGKCQCEPGFTGETCD 152
>SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNA-TGQCE-CLPGVIGEKCDRC 591
CNCN C+A TG+C CL IG+ C++C
Sbjct: 544 CNCNRHAK---SCDANTGKCNNCLHNTIGKNCEQC 575
>SB_45586| Best HMM Match : EGF_2 (HMM E-Value=0.00035)
Length = 330
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 704 CSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD-RC 591
C C+ N G N TG+C+C G +G+ CD RC
Sbjct: 223 CDKLKCS-NGGKCRANYVNNTGECQCELGFVGDTCDERC 260
>SB_29838| Best HMM Match : EGF (HMM E-Value=1.2e-15)
Length = 373
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 704 CSFSDCNCNTGYSVGFMCNATG-QCECLPGVIGEKCDRCPE 585
C + C+ G + C +C CL G G+KC+ E
Sbjct: 229 CKYGSFTCSNGGTCEVDCKTLRPRCHCLAGFSGDKCENIDE 269
>SB_48904| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 335
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 532 SLNSFCNSYRWVLIPQEGCLECDSCTDALIFSV 434
S+N + RWV + GC SC + LI+SV
Sbjct: 266 SINGQFSQDRWVYLVYTGCAGLASCVNPLIYSV 298
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 710 VKCSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKC 600
+ C+ DC + S C A+ C C PG G +C
Sbjct: 71 ISCAVPDCAAVSQCSSHGDCVASNTCRCHPGYQGSRC 107
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 695 SDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDR 594
SDC S C A CEC PG G C++
Sbjct: 192 SDCTAVQECSKRGYCMAPDTCECYPGWDGPSCNK 225
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 737 YTKCRTEKNV-KCSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
YT + N+ +C+ S C N G+ M NA C CLPG G CD
Sbjct: 1698 YTGITCDINIDECASSPCQ-NGGFCTD-MINAF-TCTCLPGYTGITCD 1742
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 683 CNTGYSVGFMCNATGQCECLPGVIGEKCD 597
C G + F+ + QC+CLPG G C+
Sbjct: 636 CLHGAACIFLSDGGSQCQCLPGYTGAFCE 664
>SB_16291| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-11)
Length = 423
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 704 CSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
C C+ N G N TG+C+C G +G+ CD
Sbjct: 118 CDKLKCS-NGGKCPANYVNNTGECQCELGFVGDTCD 152
>SB_7527| Best HMM Match : DSL (HMM E-Value=2.5e-34)
Length = 542
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 692 DCNCNTGYSVGFMCNA-TGQCECLPGVIGEKCDR 594
DC+ + F CN+ TG+ C+ G G++CDR
Sbjct: 342 DCSKYCAPTGNFACNSLTGERGCVAGWYGDQCDR 375
>SB_3772| Best HMM Match : EGF (HMM E-Value=6.3e-06)
Length = 519
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -3
Query: 725 RTEKNVKCSFSDCNCNTGYSV--GFMCNATGQCECLPGVIGEKCDR 594
+T + C+ +C G G C + C C G GE+C++
Sbjct: 473 QTSEEKPCNLQECPAQCGLPCLNGGSCVSRNTCACKKGYTGERCEK 518
>SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 722 TEKNVKCSFSDCNCNTGYSVGFMCNATG--QCECLPGVIGEKCDRCPER 582
T KN + ++C+ N + G N G C C G G+ C++ P +
Sbjct: 309 TGKNCEQDVNECSVNPCKNGGVCKNEHGGYSCACKAGFTGKNCEQAPSK 357
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 704 CSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD-RCPE 585
CS + C GYS C CL G G+KCD R P+
Sbjct: 1693 CSSNPCQ---GYSTCENAGGAYNCTCLSGWTGDKCDVRIPD 1730
>SB_33072| Best HMM Match : Arm (HMM E-Value=0.00043)
Length = 701
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/56 (19%), Positives = 34/56 (60%)
Frame = -2
Query: 285 LHDATPQLHIHQTELLRPKVAQLKTVDIGEVTSSIKTLETSAKNLLRSVSLLNIYT 118
+HD + +L +H + ++P+V ++ ++ +V ++++ + T ++++S +YT
Sbjct: 275 MHDTSYRLDLHLFDSIKPQVCTVQAINTPQV-NTVQAINTPHVYTVQAISSPQVYT 329
>SB_25361| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 4833
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 701 SFSDCNCNTGYSVGFMCNATG--QCECLPGVIGEKCD 597
S +DCN N + G + G +C C+PG G C+
Sbjct: 3698 SVNDCNPNPCRNEGTCTDNNGSFKCSCIPGYTGRLCE 3734
>SB_4732| Best HMM Match : EGF (HMM E-Value=2.4e-10)
Length = 57
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 704 CSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDR 594
C+ S CN N + +CECLPG G CD+
Sbjct: 5 CASSPCNNNAKC---IDTKESYRCECLPGFQGANCDK 38
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 704 CSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCDR 594
C+ S CN N + +CECLPG G CD+
Sbjct: 807 CASSPCNNNAKC---IDTKESYRCECLPGFQGANCDK 840
>SB_18365| Best HMM Match : EGF (HMM E-Value=0.00021)
Length = 188
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 644 TGQCECLPGVIGEKCDRCP 588
TG+C+C PG GE C+ P
Sbjct: 137 TGKCQCGPGFTGETCETEP 155
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 737 YTKCRTEKNV-KCSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
YT R E+++ +CS S C N G V + +C C PG G++C+
Sbjct: 663 YTGTRCERDIDECSSSPC-VNGGLCVDY--TNYFECLCHPGYGGDRCE 707
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -3
Query: 716 KNVKCSFSDC---NCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
+N + + ++C C G + + NA QC CLPG G CD
Sbjct: 286 QNCETNINECIGAACANGSTCIDLVNAY-QCTCLPGFTGRHCD 327
>SB_58129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -3
Query: 695 SDCNCNTGYSVGF--MCNAT-GQCECLPGVIGEKCDRC 591
++C C+ +V +C+ GQC C V G CD C
Sbjct: 44 NECGCHGAGTVNASDVCDKLDGQCPCKQAVTGRTCDTC 81
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Frame = -3
Query: 737 YTKCR---TEKNVKCSFSDC---NCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
Y +CR T KN + C C G S C+C PG G+ C+
Sbjct: 550 YCRCRDGYTGKNCEVRIDSCIDHTCQNGASCVSSTPYAYSCQCKPGYTGQYCE 602
>SB_28917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 704 CSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
C C+ N G + TG+C C P IG+ CD
Sbjct: 103 CDQMKCS-NGGKCRANYVDNTGKCHCTPDFIGDTCD 137
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = -3
Query: 689 CNCNTGYSVGFMCN-ATGQCECLP----GVIGEKCDRC 591
CNC G + +CN TG+C C P G +C +C
Sbjct: 2006 CNCPVGANFNPVCNKTTGECYCNPYHYRSPKGNECLKC 2043
>SB_49545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 644 TGQCECLPGVIGEKCD 597
TG+C+C PG GE C+
Sbjct: 137 TGKCQCGPGFTGETCE 152
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -3
Query: 728 CRTEKNVKCSFSDCNCNTGYSVGFMCNATG--QCECLPGVIGE--KCDRCP 588
CRT N + C+ GY + C A G C G G+ KCD CP
Sbjct: 1164 CRTGDNEELLLLCDGCDRGYHT-YCCMAAGGDNCCVCGGPAGKMAKCDNCP 1213
>SB_40116| Best HMM Match : EGF (HMM E-Value=0)
Length = 340
Score = 28.3 bits (60), Expect = 7.6
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -3
Query: 638 QCECLPGVIGEKCD 597
+C+CLPG +G+ C+
Sbjct: 138 ECQCLPGFVGDNCE 151
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 28.3 bits (60), Expect = 7.6
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -3
Query: 638 QCECLPGVIGEKCD 597
+C+CLPG +G+ C+
Sbjct: 7184 ECQCLPGFVGDNCE 7197
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = -2
Query: 285 LHDATPQLHIHQTELLRPKVAQLKTVDIGEVTSSIKTLETSAKNLLRSVSLL 130
L + T QLH EL A LKT+ + +TLE S KNLL+ VS L
Sbjct: 454 LVEQTSQLHAITQEL-----ASLKTL-LETTAKEKETLEVSEKNLLQEVSAL 499
>SB_2045| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 743 YIYTKCRTEKNVKCSFSDCNCNTGYSVGFMCNATGQCECLPGVIGEKCD 597
Y T C T N +C+ C N G V + QC CL G G++C+
Sbjct: 505 YTGTNCETNIN-ECASGPCR-NNGTCVDEVNGY--QCLCLQGFTGQRCE 549
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,109,559
Number of Sequences: 59808
Number of extensions: 468091
Number of successful extensions: 1532
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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