Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1357
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF188750-1|AAF00547.1| 293|Caenorhabditis elegans putative tyro... 33 0.29
Z81098-3|CAB03179.1| 131|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF125971-7|AAD14768.2| 519|Caenorhabditis elegans Hypothetical ... 30 2.0
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr... 29 4.7
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 6.2
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 28 6.2
AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 28 8.2
AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical
protein T06D8.8 protein.
Length = 387
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 DFLTKK-QASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNP 220
D+L K A+ LA DW L+EL+ KKLWHQLT+ + VK P
Sbjct: 5 DYLNGKLAAANGPLADDWKNLKELWEKKLWHQLTVLTRSLVKKP 48
Score = 38.7 bits (86), Expect = 0.004
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Frame = +1
Query: 244 HTVVNNFLTTFESKINPLSLVEIIAHIVEQYV--NKRDAVTFLEKVETKVKMNDEALALC 417
H F+ +E ++NPL LVEI I + +K+ ++ FL K+ + N + +A+
Sbjct: 57 HEFYRLFVAEWELRVNPLQLVEICISIAQNIATKDKQKSMEFLSKIGNVI--NKDKIAVA 114
Query: 418 KVLQGQIYIEQLNDYDAAEKIIEHXXXXXXXXXXXXQFTDDSIS*PRNITESVVRLAVTT 597
++ G+I +L + D +II+ Q DS+ + R++
Sbjct: 115 RLHTGEIE-ARLENKDKNGQIID--LKSIRTQIDSTQHEVDSLVGVTEVHAPFYRVSSLY 171
Query: 598 AQ------------LRYVGCADGGEALPATERADIAFRLALSGVLAPDVYDLGELLAH 735
+ LRY+G D L ++ A L + +L +V++ GELLAH
Sbjct: 172 LREVGDFAGYYREALRYLGVEDANN-LTTEQKQVHAVLLGFAALLGENVHNFGELLAH 228
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 516 GVTPVHGRFYKLASEYYRVRGPTGRYYRAASVRWL 620
GVT VH FY+++S Y R G YYR A +R+L
Sbjct: 156 GVTEVHAPFYRVSSLYLREVGDFAGYYREA-LRYL 189
>AF188750-1|AAF00547.1| 293|Caenorhabditis elegans putative
tyrosine kinase receptorW04G5.6B protein.
Length = 293
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 259 NFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVE-TKVKMNDEALALCK 420
N + + E N LSLV ++ IV +YV D + FL K + K + + +LCK
Sbjct: 93 NVMCSMEKHPNILSLVGVVTMIVTEYVEDGDLLKFLRKCKFDKDSVKLDEKSLCK 147
>Z81098-3|CAB03179.1| 131|Caenorhabditis elegans Hypothetical
protein K07A12.3 protein.
Length = 131
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 107 KQASEPALAADWAKLEELYNKKLWHQLTLK 196
+ A PA+ ADWAKL++ K + L++K
Sbjct: 46 RSADIPAIKADWAKLQKFIETKQYVNLSIK 75
>AF125971-7|AAD14768.2| 519|Caenorhabditis elegans Hypothetical
protein Y4C6B.6 protein.
Length = 519
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 143 AKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLSI 259
A +E Y + +WH + + +FVK A++ G N+I+ S+
Sbjct: 426 ATAQEYYKQPIWHVMA-QFSKFVKPGAIRVGINIIEKSV 463
>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
protein T14E8.1c protein.
Length = 1018
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 322 IVEQYVNKRDAVTFLEKVETKVKMND 399
I+ +Y+ K D +F+E VE +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834
>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
protein T14E8.1b protein.
Length = 1030
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 322 IVEQYVNKRDAVTFLEKVETKVKMND 399
I+ +Y+ K D +F+E VE +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834
>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
protein T14E8.1a protein.
Length = 1086
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 322 IVEQYVNKRDAVTFLEKVETKVKMND 399
I+ +Y+ K D +F+E VE +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 707 TSGASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRT-TDSVI 561
++ + TP +SL A S + + PS+ P +S VT+SR+ TDSVI
Sbjct: 2 STSSRTPSPSSLSACGGPSSSTTTAHPSSSP--KSKTSVTSSRSDTDSVI 49
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 707 TSGASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRT-TDSVI 561
++ + TP +SL A S + + PS+ P +S VT+SR+ TDSVI
Sbjct: 2 STSSRTPSPSSLSACGGPSSSTTTAHPSSSP--KSKTSVTSSRSDTDSVI 49
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 725 NSPKSYTSGASTPERASLKAISARSVAGRASPPSAQ 618
+S +S G+S+P AS + A + A +ASPP Q
Sbjct: 984 SSDESNGEGSSSPSEASRSPMEAFNEASKASPPPNQ 1019
>AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical
protein ZK484.4a protein.
Length = 919
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 698 ASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRTT 573
A+TP R+ + I + G A S+ P CA T+SRT+
Sbjct: 535 ANTPIRSVTRPIRKSVLFGSAGSMSSSPATTKCARGTSSRTS 576
>AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical
protein ZK484.4b protein.
Length = 873
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 698 ASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRTT 573
A+TP R+ + I + G A S+ P CA T+SRT+
Sbjct: 535 ANTPIRSVTRPIRKSVLFGSAGSMSSSPATTKCARGTSSRTS 576
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,453,192
Number of Sequences: 27780
Number of extensions: 336466
Number of successful extensions: 968
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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