BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1357 (752 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical pr... 47 2e-05 AF188750-1|AAF00547.1| 293|Caenorhabditis elegans putative tyro... 33 0.29 Z81098-3|CAB03179.1| 131|Caenorhabditis elegans Hypothetical pr... 30 2.0 AF125971-7|AAD14768.2| 519|Caenorhabditis elegans Hypothetical ... 30 2.0 U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr... 29 4.7 U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr... 29 4.7 U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr... 29 4.7 U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 6.2 U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 6.2 AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 28 6.2 AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 28 8.2 AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 28 8.2 >Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical protein T06D8.8 protein. Length = 387 Score = 46.8 bits (106), Expect = 2e-05 Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +2 Query: 92 DFLTKK-QASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNP 220 D+L K A+ LA DW L+EL+ KKLWHQLT+ + VK P Sbjct: 5 DYLNGKLAAANGPLADDWKNLKELWEKKLWHQLTVLTRSLVKKP 48 Score = 38.7 bits (86), Expect = 0.004 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 14/178 (7%) Frame = +1 Query: 244 HTVVNNFLTTFESKINPLSLVEIIAHIVEQYV--NKRDAVTFLEKVETKVKMNDEALALC 417 H F+ +E ++NPL LVEI I + +K+ ++ FL K+ + N + +A+ Sbjct: 57 HEFYRLFVAEWELRVNPLQLVEICISIAQNIATKDKQKSMEFLSKIGNVI--NKDKIAVA 114 Query: 418 KVLQGQIYIEQLNDYDAAEKIIEHXXXXXXXXXXXXQFTDDSIS*PRNITESVVRLAVTT 597 ++ G+I +L + D +II+ Q DS+ + R++ Sbjct: 115 RLHTGEIE-ARLENKDKNGQIID--LKSIRTQIDSTQHEVDSLVGVTEVHAPFYRVSSLY 171 Query: 598 AQ------------LRYVGCADGGEALPATERADIAFRLALSGVLAPDVYDLGELLAH 735 + LRY+G D L ++ A L + +L +V++ GELLAH Sbjct: 172 LREVGDFAGYYREALRYLGVEDANN-LTTEQKQVHAVLLGFAALLGENVHNFGELLAH 228 Score = 33.1 bits (72), Expect = 0.22 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +3 Query: 516 GVTPVHGRFYKLASEYYRVRGPTGRYYRAASVRWL 620 GVT VH FY+++S Y R G YYR A +R+L Sbjct: 156 GVTEVHAPFYRVSSLYLREVGDFAGYYREA-LRYL 189 >AF188750-1|AAF00547.1| 293|Caenorhabditis elegans putative tyrosine kinase receptorW04G5.6B protein. Length = 293 Score = 32.7 bits (71), Expect = 0.29 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +1 Query: 259 NFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVE-TKVKMNDEALALCK 420 N + + E N LSLV ++ IV +YV D + FL K + K + + +LCK Sbjct: 93 NVMCSMEKHPNILSLVGVVTMIVTEYVEDGDLLKFLRKCKFDKDSVKLDEKSLCK 147 >Z81098-3|CAB03179.1| 131|Caenorhabditis elegans Hypothetical protein K07A12.3 protein. Length = 131 Score = 29.9 bits (64), Expect = 2.0 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 Query: 107 KQASEPALAADWAKLEELYNKKLWHQLTLK 196 + A PA+ ADWAKL++ K + L++K Sbjct: 46 RSADIPAIKADWAKLQKFIETKQYVNLSIK 75 >AF125971-7|AAD14768.2| 519|Caenorhabditis elegans Hypothetical protein Y4C6B.6 protein. Length = 519 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = +2 Query: 143 AKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLSI 259 A +E Y + +WH + + +FVK A++ G N+I+ S+ Sbjct: 426 ATAQEYYKQPIWHVMA-QFSKFVKPGAIRVGINIIEKSV 463 >U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical protein T14E8.1c protein. Length = 1018 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 322 IVEQYVNKRDAVTFLEKVETKVKMND 399 I+ +Y+ K D +F+E VE +KM D Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834 >U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical protein T14E8.1b protein. Length = 1030 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 322 IVEQYVNKRDAVTFLEKVETKVKMND 399 I+ +Y+ K D +F+E VE +KM D Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834 >U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical protein T14E8.1a protein. Length = 1086 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 322 IVEQYVNKRDAVTFLEKVETKVKMND 399 I+ +Y+ K D +F+E VE +KM D Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834 >U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical protein C01F4.2b protein. Length = 622 Score = 28.3 bits (60), Expect = 6.2 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -1 Query: 707 TSGASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRT-TDSVI 561 ++ + TP +SL A S + + PS+ P +S VT+SR+ TDSVI Sbjct: 2 STSSRTPSPSSLSACGGPSSSTTTAHPSSSP--KSKTSVTSSRSDTDSVI 49 >U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical protein C01F4.2a protein. Length = 986 Score = 28.3 bits (60), Expect = 6.2 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -1 Query: 707 TSGASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRT-TDSVI 561 ++ + TP +SL A S + + PS+ P +S VT+SR+ TDSVI Sbjct: 2 STSSRTPSPSSLSACGGPSSSTTTAHPSSSP--KSKTSVTSSRSDTDSVI 49 >AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical protein Y75B8A.13 protein. Length = 1420 Score = 28.3 bits (60), Expect = 6.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -1 Query: 725 NSPKSYTSGASTPERASLKAISARSVAGRASPPSAQ 618 +S +S G+S+P AS + A + A +ASPP Q Sbjct: 984 SSDESNGEGSSSPSEASRSPMEAFNEASKASPPPNQ 1019 >AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical protein ZK484.4a protein. Length = 919 Score = 27.9 bits (59), Expect = 8.2 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -1 Query: 698 ASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRTT 573 A+TP R+ + I + G A S+ P CA T+SRT+ Sbjct: 535 ANTPIRSVTRPIRKSVLFGSAGSMSSSPATTKCARGTSSRTS 576 >AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical protein ZK484.4b protein. Length = 873 Score = 27.9 bits (59), Expect = 8.2 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -1 Query: 698 ASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRTT 573 A+TP R+ + I + G A S+ P CA T+SRT+ Sbjct: 535 ANTPIRSVTRPIRKSVLFGSAGSMSSSPATTKCARGTSSRTS 576 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,453,192 Number of Sequences: 27780 Number of extensions: 336466 Number of successful extensions: 968 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 925 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 967 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1788025660 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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