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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1357
         (752 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical pr...    47   2e-05
AF188750-1|AAF00547.1|  293|Caenorhabditis elegans putative tyro...    33   0.29 
Z81098-3|CAB03179.1|  131|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AF125971-7|AAD14768.2|  519|Caenorhabditis elegans Hypothetical ...    30   2.0  
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U97192-2|AAO38678.1|  622|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U97192-1|AAB52434.2|  986|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical...    28   6.2  
AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical ...    28   8.2  
AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical
           protein T06D8.8 protein.
          Length = 387

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +2

Query: 92  DFLTKK-QASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNP 220
           D+L  K  A+   LA DW  L+EL+ KKLWHQLT+  +  VK P
Sbjct: 5   DYLNGKLAAANGPLADDWKNLKELWEKKLWHQLTVLTRSLVKKP 48



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
 Frame = +1

Query: 244 HTVVNNFLTTFESKINPLSLVEIIAHIVEQYV--NKRDAVTFLEKVETKVKMNDEALALC 417
           H     F+  +E ++NPL LVEI   I +     +K+ ++ FL K+   +  N + +A+ 
Sbjct: 57  HEFYRLFVAEWELRVNPLQLVEICISIAQNIATKDKQKSMEFLSKIGNVI--NKDKIAVA 114

Query: 418 KVLQGQIYIEQLNDYDAAEKIIEHXXXXXXXXXXXXQFTDDSIS*PRNITESVVRLAVTT 597
           ++  G+I   +L + D   +II+             Q   DS+     +     R++   
Sbjct: 115 RLHTGEIE-ARLENKDKNGQIID--LKSIRTQIDSTQHEVDSLVGVTEVHAPFYRVSSLY 171

Query: 598 AQ------------LRYVGCADGGEALPATERADIAFRLALSGVLAPDVYDLGELLAH 735
            +            LRY+G  D    L   ++   A  L  + +L  +V++ GELLAH
Sbjct: 172 LREVGDFAGYYREALRYLGVEDANN-LTTEQKQVHAVLLGFAALLGENVHNFGELLAH 228



 Score = 33.1 bits (72), Expect = 0.22
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +3

Query: 516 GVTPVHGRFYKLASEYYRVRGPTGRYYRAASVRWL 620
           GVT VH  FY+++S Y R  G    YYR A +R+L
Sbjct: 156 GVTEVHAPFYRVSSLYLREVGDFAGYYREA-LRYL 189


>AF188750-1|AAF00547.1|  293|Caenorhabditis elegans putative
           tyrosine kinase receptorW04G5.6B protein.
          Length = 293

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 259 NFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVE-TKVKMNDEALALCK 420
           N + + E   N LSLV ++  IV +YV   D + FL K +  K  +  +  +LCK
Sbjct: 93  NVMCSMEKHPNILSLVGVVTMIVTEYVEDGDLLKFLRKCKFDKDSVKLDEKSLCK 147


>Z81098-3|CAB03179.1|  131|Caenorhabditis elegans Hypothetical
           protein K07A12.3 protein.
          Length = 131

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 107 KQASEPALAADWAKLEELYNKKLWHQLTLK 196
           + A  PA+ ADWAKL++    K +  L++K
Sbjct: 46  RSADIPAIKADWAKLQKFIETKQYVNLSIK 75


>AF125971-7|AAD14768.2|  519|Caenorhabditis elegans Hypothetical
           protein Y4C6B.6 protein.
          Length = 519

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +2

Query: 143 AKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLSI 259
           A  +E Y + +WH +  +  +FVK  A++ G N+I+ S+
Sbjct: 426 ATAQEYYKQPIWHVMA-QFSKFVKPGAIRVGINIIEKSV 463


>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
           protein T14E8.1c protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 322 IVEQYVNKRDAVTFLEKVETKVKMND 399
           I+ +Y+ K D  +F+E VE  +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834


>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
           protein T14E8.1b protein.
          Length = 1030

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 322 IVEQYVNKRDAVTFLEKVETKVKMND 399
           I+ +Y+ K D  +F+E VE  +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834


>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
           protein T14E8.1a protein.
          Length = 1086

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 322 IVEQYVNKRDAVTFLEKVETKVKMND 399
           I+ +Y+ K D  +F+E VE  +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834


>U97192-2|AAO38678.1|  622|Caenorhabditis elegans Hypothetical
           protein C01F4.2b protein.
          Length = 622

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -1

Query: 707 TSGASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRT-TDSVI 561
           ++ + TP  +SL A    S +   + PS+ P  +S   VT+SR+ TDSVI
Sbjct: 2   STSSRTPSPSSLSACGGPSSSTTTAHPSSSP--KSKTSVTSSRSDTDSVI 49


>U97192-1|AAB52434.2|  986|Caenorhabditis elegans Hypothetical
           protein C01F4.2a protein.
          Length = 986

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -1

Query: 707 TSGASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRT-TDSVI 561
           ++ + TP  +SL A    S +   + PS+ P  +S   VT+SR+ TDSVI
Sbjct: 2   STSSRTPSPSSLSACGGPSSSTTTAHPSSSP--KSKTSVTSSRSDTDSVI 49


>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
            protein Y75B8A.13 protein.
          Length = 1420

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 725  NSPKSYTSGASTPERASLKAISARSVAGRASPPSAQ 618
            +S +S   G+S+P  AS   + A + A +ASPP  Q
Sbjct: 984  SSDESNGEGSSSPSEASRSPMEAFNEASKASPPPNQ 1019


>AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical
           protein ZK484.4a protein.
          Length = 919

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 698 ASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRTT 573
           A+TP R+  + I    + G A   S+ P    CA  T+SRT+
Sbjct: 535 ANTPIRSVTRPIRKSVLFGSAGSMSSSPATTKCARGTSSRTS 576


>AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical
           protein ZK484.4b protein.
          Length = 873

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 698 ASTPERASLKAISARSVAGRASPPSAQPTYRSCAVVTASRTT 573
           A+TP R+  + I    + G A   S+ P    CA  T+SRT+
Sbjct: 535 ANTPIRSVTRPIRKSVLFGSAGSMSSSPATTKCARGTSSRTS 576


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,453,192
Number of Sequences: 27780
Number of extensions: 336466
Number of successful extensions: 968
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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