Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1357
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   0.58 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   1.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    24   1.3  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   5.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   7.1  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 741 ELVSQQFSQIIYVRSQHSRES*SEGDIST 655
           ++V+Q+FS++I  + QH+R     G + T
Sbjct: 257 KMVNQKFSELIQSKPQHARRKVLAGIVQT 285


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -2

Query: 733 EPTILPNHIRPEPALQRELV*RRYQHVPWQVGPHPR-RRSQRTEA 602
           +P   P  +R E   + E    R  ++P    PHPR RR    EA
Sbjct: 23  DPPTRPTRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEA 67


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -2

Query: 733 EPTILPNHIRPEPALQRELV*RRYQHVPWQVGPHPR-RRSQRTEA 602
           +P   P  +R E   + E    R  ++P    PHPR RR    EA
Sbjct: 24  DPPTRPTRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEA 68


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 733 EPTILPNHIRPEPALQRELV*RRYQHVPWQVGPHPRRRSQ 614
           +P   P  +R E   + E    R  ++P    PHPR R +
Sbjct: 24  DPPTRPARLRREAKPEAEPGNNRPIYIPQPRPPHPRLRRE 63


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 528 VHGRFYKLASEYYRVR 575
           +HG F +    YY++R
Sbjct: 578 IHGNFIESLGNYYKIR 593


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 122 PALAADWAKLEELYNK 169
           P LAA+ AKLEE+  K
Sbjct: 287 PKLAANRAKLEEIAGK 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,518
Number of Sequences: 438
Number of extensions: 4220
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)