Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1356
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.8  
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    23   8.7  
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    23   8.7  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    23   8.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 302  SVSRLEVRQFMTRCSKALFRYSSKE*DLPCISNESQHHH 418
            SV +L+ R  +   S  L  Y   + DLP  SN    HH
Sbjct: 1930 SVGKLKQRGIVKLSSNELSNYLPNDSDLPASSNFILLHH 1968


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 302  SVSRLEVRQFMTRCSKALFRYSSKE*DLPCISNESQHHH 418
            SV +L+ R  +   S  L  Y   + DLP  SN    HH
Sbjct: 1931 SVGKLKQRGIVKLSSNELSNYLPNDSDLPASSNFILLHH 1969


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 337 RHELPYLQTTDTYFSIRNVAFLATSF 260
           RH LP+L+    Y +IR VA    SF
Sbjct: 26  RHGLPHLKPEIPYGNIRTVAEKKESF 51


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = -1

Query: 504 TGIVLITVLFNITSQYMHYFMHHTALTAR**C*DSFEIQGRSY--SFEEYLNSALEQRVM 331
           T  +L++VLF+  S YM  F H   +     C       GR    +  EY    L  R  
Sbjct: 10  TAALLLSVLFSTGSCYMRDFAHKNEINEMRVC---IGTNGRMSVPANREYHYKNLRDRYT 66

Query: 330 NC 325
           NC
Sbjct: 67  NC 68


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 337 RHELPYLQTTDTYFSIRNVAFLATSF 260
           RH LP+L+    Y +IR VA    SF
Sbjct: 26  RHGLPHLKPEIPYGNIRTVAEKKESF 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,415
Number of Sequences: 2352
Number of extensions: 12846
Number of successful extensions: 72
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)