Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1356
         (828 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ...    31   6.7  
AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple ...    31   6.7  
AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple ...    31   6.7  

>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
            domains protein 1 short form protein.
          Length = 3389

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 605  STIDYRCKLGCDCVSKNETRKCCLTLTRSVLLSRCITAKCEQ 730
            ST+ +RC+ G   +  + TR C   LT S + + CI   C Q
Sbjct: 3062 STVFFRCRKGYH-IQGSTTRTCLANLTWSGIQTECIPHACRQ 3102


>AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple
            domains 1 protein protein.
          Length = 3566

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 605  STIDYRCKLGCDCVSKNETRKCCLTLTRSVLLSRCITAKCEQ 730
            ST+ +RC+ G   +  + TR C   LT S + + CI   C Q
Sbjct: 3239 STVFFRCRKGYH-IQGSTTRTCLANLTWSGIQTECIPHACRQ 3279


>AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple
            domains 1 variant protein.
          Length = 2966

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 605  STIDYRCKLGCDCVSKNETRKCCLTLTRSVLLSRCITAKCEQ 730
            ST+ +RC+ G   +  + TR C   LT S + + CI   C Q
Sbjct: 2654 STVFFRCRKGYH-IQGSTTRTCLANLTWSGIQTECIPHACRQ 2694


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,351,733
Number of Sequences: 237096
Number of extensions: 1730735
Number of successful extensions: 6529
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6529
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)