Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1354
         (858 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   1.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   1.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.3  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   4.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   4.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   4.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   4.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   4.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   7.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 443 FVHTSSYQPDTDRLYSILTDLNFSLSRFVCY*FFIL 336
           F+H  S Q DTD L  I T   F+L  ++C+ F+ L
Sbjct: 300 FIHIRSRQEDTDTLVVIYT---FNLF-YLCFCFYWL 331


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 443 FVHTSSYQPDTDRLYSILTDLNFSLSRFVCY*FFIL 336
           F+H  S Q DTD L  I T   F+L  ++C+ F+ L
Sbjct: 256 FIHIRSRQEDTDTLVVIYT---FNLF-YLCFCFYWL 287


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 127 KCTYWRNSLSSNRRHWYHVHKI 192
           +  YWR  +  N  HW H H +
Sbjct: 193 RVAYWREDIGLNLHHW-HWHLV 213


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 703 RCVSCLKNFNQNAALPTGV 759
           RC+ C K+F+Q A L   V
Sbjct: 23  RCIDCNKSFSQAANLTAHV 41


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 703 RCVSCLKNFNQNAALPTGV 759
           RC+ C K+F+Q A L   V
Sbjct: 279 RCIDCNKSFSQAANLTAHV 297


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 455 HQETFVHTSSYQPDTDRLYSI 393
           HQ  F+H + YQ + D  Y +
Sbjct: 126 HQHHFLHENKYQLEVDSGYHL 146


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 455 HQETFVHTSSYQPDTDRLYSI 393
           HQ  F+H + YQ + D  Y +
Sbjct: 126 HQHHFLHENKYQLEVDSGYHL 146


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 455 HQETFVHTSSYQPDTDRLYSI 393
           HQ  F+H + YQ + D  Y +
Sbjct: 126 HQHHFLHENKYQLEVDSGYHL 146


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 6/27 (22%)
 Frame = -3

Query: 148 NSSNKCTSCHCR------YTISCSQDT 86
           +S N CT+C C       +T+ C Q T
Sbjct: 688 SSDNPCTTCFCENGNNKCFTMECPQVT 714


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 858 VRLYGFSLGVISVLPKNCCDETENTQE 778
           V LYG  L +++ +  + C E  +T++
Sbjct: 296 VVLYGLELFILAKIVTDLCQEANSTKK 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,967
Number of Sequences: 336
Number of extensions: 4725
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)