Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1354
         (858 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    25   3.9  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    24   5.1  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    24   5.1  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    24   5.1  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    24   5.1  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   9.0  

>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 124 RKCTYWRNSLSSNRRHWYHVHKI 192
           ++  YWR  +  N  HW H H +
Sbjct: 194 QRLAYWREDIGVNLHHW-HWHLV 215


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 134 VHFLPLPVHHFLQPGYPP 81
           V+ +P P  HF  PG+ P
Sbjct: 151 VNMVPFPRLHFFMPGFAP 168


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 134 VHFLPLPVHHFLQPGYPP 81
           V+ +P P  HF  PG+ P
Sbjct: 151 VNMVPFPRLHFFMPGFAP 168


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 134 VHFLPLPVHHFLQPGYPP 81
           V+ +P P  HF  PG+ P
Sbjct: 151 VNMVPFPRLHFFMPGFAP 168


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 134 VHFLPLPVHHFLQPGYPP 81
           V+ +P P  HF  PG+ P
Sbjct: 151 VNMVPFPRLHFFMPGFAP 168


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 112 TGNGRKCTYWRNSLSSNRRHWYHVH 186
           T NG+       +L   R+H+YH++
Sbjct: 222 TSNGKGVVRLARALDYERQHFYHIN 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 906,462
Number of Sequences: 2352
Number of extensions: 19866
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)