Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1351
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF234629-1|AAF40432.1|  251|Drosophila melanogaster DID protein.       45   9e-05
BT011120-1|AAR82787.1|  291|Drosophila melanogaster LD12690p pro...    43   5e-04
AE014297-1662|AAF54931.1|  251|Drosophila melanogaster CG9829-PA...    43   5e-04

>AF234629-1|AAF40432.1|  251|Drosophila melanogaster DID protein.
          Length = 251

 Score = 45.2 bits (102), Expect = 9e-05
 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
 Frame = +3

Query: 285 VKEINGCDGSFIVNCVISYCIK-QNSPLLIVSSHNSITHYHNVGLRM--NHNLFKSCEAG 455
           + E +  DGSF+++CV+   ++  N+  L+V   +   HY N G+R+  N N+F+    G
Sbjct: 22  ISEESNVDGSFLISCVLGQRLRISNAGTLLVCLQHHYQHYFNAGMRLGYNTNIFQGKTLG 81

Query: 456 VID 464
           VID
Sbjct: 82  VID 84


>BT011120-1|AAR82787.1|  291|Drosophila melanogaster LD12690p
           protein.
          Length = 291

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +3

Query: 285 VKEINGCDGSFIVNCVISYCIK-QNSPLLIVSSHNSITHYHNVGLRM--NHNLFKSCEAG 455
           + E +  D SF+++CV+   ++  N+  L+V   +   HY N G+R+  N N+F+    G
Sbjct: 62  ISEESNVDASFLISCVLGQRLRISNAGTLLVCLQHHYQHYFNAGMRLGYNTNIFQGKTLG 121

Query: 456 VID 464
           VID
Sbjct: 122 VID 124


>AE014297-1662|AAF54931.1|  251|Drosophila melanogaster CG9829-PA
           protein.
          Length = 251

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +3

Query: 285 VKEINGCDGSFIVNCVISYCIK-QNSPLLIVSSHNSITHYHNVGLRM--NHNLFKSCEAG 455
           + E +  D SF+++CV+   ++  N+  L+V   +   HY N G+R+  N N+F+    G
Sbjct: 22  ISEESNVDASFLISCVLGQRLRISNAGTLLVCLQHHYQHYFNAGMRLGYNTNIFQGKTLG 81

Query: 456 VID 464
           VID
Sbjct: 82  VID 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,925,536
Number of Sequences: 53049
Number of extensions: 478398
Number of successful extensions: 1046
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)