Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1350
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    24   1.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   5.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.8  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 820 HKANHGAFKDESISLTDLLKEEQLKYQ 740
           HK    +F+DE IS+ +L+ EE   +Q
Sbjct: 133 HKLMSVSFEDERISVMNLITEEITTHQ 159


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 820 HKANHGAFKDESISLTDLLKEEQLKYQ 740
           HK    +F+DE IS+ +L+ EE   +Q
Sbjct: 133 HKLMSVSFEDERISVMNLITEEITTHQ 159


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 820 HKANHGAFKDESISLTDLLKEEQLKYQ 740
           HK    +F+DE IS+ +L+ EE   +Q
Sbjct: 133 HKLMSVSFEDERISVMNLITEEITTHQ 159


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -3

Query: 820 HKANHGAFKDESISLTDLLKEEQLKYQRMVAYVVFQFKKKNLLNYRYA*RTDSVDH---S 650
           HK N    K E I L  + K    +     A    + KK+N + +    +TD  D    S
Sbjct: 106 HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDALVS 165

Query: 649 TSVDRNRQTQ*GKEKT 602
            S DR +  +  ++ T
Sbjct: 166 DSDDREKDEEDKRDDT 181


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 144 FNDI*RCFIFLNKRTLIAT*L*YLDMLSR*CILQSRSTLF 25
           FNDI    I  N     A  L Y+DM+ +  + Q  S +F
Sbjct: 112 FNDIFGWIILCNIFEAAAKSLIYIDMIIKKNVTQQNSDVF 151


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +2

Query: 26  NNVLRLCRIHYR--ESMSKYYSYVAISVLL 109
           +N+  LCR+HY+    M K  S  ++ +L+
Sbjct: 228 DNLYILCRLHYKLTSVMQKINSAFSVQLLV 257


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +2

Query: 26  NNVLRLCRIHYR--ESMSKYYSYVAISVLL 109
           +N+  LCR+HY+    M K  S  ++ +L+
Sbjct: 228 DNLYILCRLHYKLTSVMQKINSAFSVQLLV 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,316
Number of Sequences: 336
Number of extensions: 4222
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)