Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1348
(877 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 28 0.11
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 25 1.0
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 23 3.1
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 4.2
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 22 5.5
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 22 5.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.5
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 5.5
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 9.6
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.6
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.6
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 27.9 bits (59), Expect = 0.11
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 419 RCTRPVVPPVS-CWTPATVSPTPCPSTRDTHPPRHPASGLSRS---RPHRLPHEDPHRAR 586
R R VVPP C P+T+ P P D++ P++ + P +P D +R R
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIPQNNPKNKQHNFNLPPGAIPVPDKNRPR 254
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 479 TPCPSTRDTHPPRHPASG 532
TP S+ +PP HP SG
Sbjct: 64 TPNKSSTSPYPPNHPLSG 81
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 92 GTRREEHHLLRNRP 51
G R+ HHL++N+P
Sbjct: 82 GVRKVLHHLIKNKP 95
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 336 GQQREDDPDHVRNIQHARHVRRHPSRA 416
GQ DP+ V + H+ HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 92 GTRREEHHLLRNRP 51
G R+ HHL+ N+P
Sbjct: 82 GVRKVIHHLIENKP 95
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 92 GTRREEHHLLRNRP 51
G R+ HHL+ N+P
Sbjct: 82 GVRKVIHHLIENKP 95
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 5.5
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +2
Query: 404 SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHPPRHPAS 529
+KP T V + W P + + P + HPP P S
Sbjct: 1343 AKPAQSTTS--VSTTTSWNPGSTTNYPEWQPTEWHPPIPPTS 1382
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 490 IYEGYAPPTPSCV 528
+ GYA P P C+
Sbjct: 2188 VLRGYAKPDPKCI 2200
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/33 (24%), Positives = 15/33 (45%)
Frame = +2
Query: 425 TRPVVPPVSCWTPATVSPTPCPSTRDTHPPRHP 523
T + P ++CW+ + P P + P + P
Sbjct: 314 TTVMSPTINCWSLTSSPPPPYQISAQPTPSQSP 346
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 785 PRSWVWKLAASTRQHITPS*SATWTSV 865
PRS++ L+ S R H+ SA T++
Sbjct: 196 PRSYIPPLSTSMRSHLCNWGSANSTNI 222
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 785 PRSWVWKLAASTRQHITPS*SATWTSV 865
PRS++ L+ S R H+ SA T++
Sbjct: 356 PRSYIPPLSTSMRSHLCNWGSANSTNI 382
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 785 PRSWVWKLAASTRQHITPS*SATWTSV 865
PRS++ L+ S R H+ SA T++
Sbjct: 356 PRSYIPPLSTSMRSHLCNWGSANSTNI 382
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,675
Number of Sequences: 336
Number of extensions: 5029
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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