Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1348
(877 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 175 7e-45
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 105 8e-24
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 105 1e-23
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 92 1e-19
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 64 2e-11
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 60 4e-10
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 57 3e-09
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 53 6e-08
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 40 5e-04
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 32 0.093
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.12
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.22
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.38
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 29 0.87
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 28 1.5
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 28 1.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.7
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.5
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.5
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 27 3.5
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 3.5
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.5
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 27 3.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.5
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.5
SPBC409.20c |psh3||ER chaperone SHR3 homologue Psh3|Schizosaccha... 27 4.6
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 27 4.6
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 6.1
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 6.1
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 6.1
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 26 6.1
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 8.1
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 26 8.1
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 175 bits (426), Expect = 7e-45
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGIV NWDDMEKI
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKI 85
Score = 165 bits (401), Expect = 7e-42
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 441
TFYNELRVAPEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRT
Sbjct: 89 TFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRT 148
Query: 442 TGIVLDSGDGVSHTVPIYEGYAPP 513
TGIVLDSGDGV+HTVPIYEGYA P
Sbjct: 149 TGIVLDSGDGVTHTVPIYEGYALP 172
Score = 164 bits (399), Expect = 1e-41
Identities = 79/90 (87%), Positives = 83/90 (92%)
Frame = +3
Query: 498 GIRTPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 677
G PHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRDIKEKLCYVALDFEQE+
Sbjct: 168 GYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQEL 227
Query: 678 ATAASSSSLEKSYELPDGQVITIGNERFLA 767
TAA SSSLEKSYELPDGQVITIGNERF A
Sbjct: 228 QTAAQSSSLEKSYELPDGQVITIGNERFRA 257
Score = 51.6 bits (118), Expect = 1e-07
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +1
Query: 766 PRGSLPTSFLGMEACGIHETTYNSIMKCDVDIRK 867
P S LG+E GIHE TYNSIMKCDVDIRK
Sbjct: 258 PEALFQPSALGLENAGIHEATYNSIMKCDVDIRK 291
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 105 bits (252), Expect = 8e-24
Identities = 46/79 (58%), Positives = 61/79 (77%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 441
TF+ +L++ P +LLTE P+NP ANREKM + MFE + +YVAIQAVLSLYA G +
Sbjct: 89 TFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLS 148
Query: 442 TGIVLDSGDGVSHTVPIYE 498
+G+V+DSGDGV+H VP+YE
Sbjct: 149 SGVVVDSGDGVTHIVPVYE 167
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/83 (48%), Positives = 60/83 (72%)
Frame = +3
Query: 513 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 692
H + RLD+AGRD T YL+ +L +GY+F TA+ E VR++KEKLCYV+ D E + +
Sbjct: 173 HLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDHKLSEE 232
Query: 693 SSSLEKSYELPDGQVITIGNERF 761
++ L ++Y LPDG+VI +G+ER+
Sbjct: 233 TTVLMRNYTLPDGRVIKVGSERY 255
Score = 79.0 bits (186), Expect = 8e-16
Identities = 38/84 (45%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 181
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
R +L +KYP+E+GI+ ++++M ++
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQL 85
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 793 LGMEACGIHETTYNSIMKCDVDIRK 867
+G E G+ E +++I DVDIRK
Sbjct: 267 VGSEQPGLSEFIFDTIQAADVDIRK 291
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 105 bits (251), Expect = 1e-23
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 5/204 (2%)
Frame = +1
Query: 274 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 453
+L PEEHP+LLTE PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTGIV
Sbjct: 98 QLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIV 157
Query: 454 LDSGDGVSHTVPIYEGYAPPTPSCVWT*PVXXXXXXXXXXXXXXXXXXXXXXXGKSCVTS 633
L+ GDG++H+VPIY+G++ PS + + + +
Sbjct: 158 LECGDGLTHSVPIYDGFS--IPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVR 215
Query: 634 --RRSC---ATSLLTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSLPRGSLPTSFLG 798
+ C A+ + W P + L + T+ + S P +G
Sbjct: 216 EIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTI--TLGTECFSAPEVLFNPEMMG 273
Query: 799 MEACGIHETTYNSIMKCDVDIRKT 870
EA G+H + SI+ D+D+R T
Sbjct: 274 SEASGLHIQLFKSILLSDIDLRST 297
Score = 102 bits (244), Expect = 8e-23
Identities = 44/78 (56%), Positives = 58/78 (74%)
Frame = +2
Query: 20 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 199
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 200 KYPIEHGIVTNWDDMEKI 253
+ PIE GI+ NW DME+I
Sbjct: 72 QRPIERGIIQNWSDMEEI 89
Score = 86.6 bits (205), Expect = 4e-18
Identities = 42/96 (43%), Positives = 58/96 (60%)
Frame = +3
Query: 498 GIRTPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 677
G P AI + ++ GRD+TDYL L + G+ ++AE+EIVR+IKEK CYVA DF E+
Sbjct: 173 GFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEI 232
Query: 678 ATAASSSSLEKSYELPDGQVITIGNERFLAQRLSSN 785
+ +Y+LPD Q IT+G E F A + N
Sbjct: 233 ESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVLFN 268
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 91.9 bits (218), Expect = 1e-19
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 8/89 (8%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 441
+ + LR PE+H LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS +
Sbjct: 112 SLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTS 171
Query: 442 --------TGIVLDSGDGVSHTVPIYEGY 504
TG V+DSGDGV+H +P+ EGY
Sbjct: 172 SKVTDRSLTGTVVDSGDGVTHIIPVAEGY 200
Score = 51.6 bits (118), Expect = 1e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 24/101 (23%)
Frame = +2
Query: 20 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 148
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 149 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEK 250
D ++G++A K +L YPI HG + NWD ME+
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMER 107
Score = 37.9 bits (84), Expect = 0.002
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +3
Query: 516 AILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIKEKLCYVALDFEQEMA--T 683
+I + LAGRD+T ++ +L +R S TAER IKE+ CYV D +E +
Sbjct: 205 SIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYVCPDIVKEFSRFD 259
Query: 684 AASSSSLEKSYELPDGQ--VITIGNERFLAQRLSSN 785
L+ + E G I +G ERFLA + N
Sbjct: 260 REPDRYLKYASESITGHSTTIDVGFERFLAPEIFFN 295
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 64.5 bits (150), Expect = 2e-11
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 274 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 453
+L+ P EHP+L+TE NP NR K + MFE+ PA Y+A Q + +ASG+ T +
Sbjct: 91 QLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACL 150
Query: 454 LDSGDGVSHTVPIYEGY 504
+D G S IY+G+
Sbjct: 151 VDIGAERSSVSAIYDGF 167
Score = 44.0 bits (99), Expect = 3e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 185 GILTLKYPIEHGIVTNWD 238
G + +K I +G V NWD
Sbjct: 62 G-MEIKNAIRNGWVENWD 78
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 60.1 bits (139), Expect = 4e-10
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +1
Query: 295 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGD 468
EHP+ +TE NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G+
Sbjct: 115 EHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGN 174
Query: 469 GVSHTVPIYEG 501
SH +P+ G
Sbjct: 175 AASHVIPVLNG 185
Score = 50.4 bits (115), Expect = 3e-07
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 199
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGNDTLIEVGSRSI 82
Query: 200 -KYPIEHGIVTNWDDMEKI 253
+ P E +++NWD ME++
Sbjct: 83 ARSPFERNVISNWDLMEQV 101
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/76 (30%), Positives = 47/76 (61%)
Frame = +1
Query: 274 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 453
+L+V P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T ++
Sbjct: 94 KLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALI 153
Query: 454 LDSGDGVSHTVPIYEG 501
+D G + P+ +G
Sbjct: 154 VDIGSDNASVTPVVDG 169
Score = 43.6 bits (98), Expect = 4e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 185 GI--LTLKYPIEHGIVTNWD 238
I + +K +GI+ +W+
Sbjct: 62 PIPGMEVKNGKSNGIIQDWE 81
Score = 29.5 bits (63), Expect = 0.66
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 591 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFLAQ 770
S+ +R ++ + KE + V LD + A A+S + K +E PDG G ERF
Sbjct: 243 SYEIFQKRRVIEEWKESVLDV-LDTPFDEAKASSRNP--KPFEFPDGVTHKFGQERFRIS 299
Query: 771 RLSSN 785
+ N
Sbjct: 300 EILFN 304
Score = 27.5 bits (58), Expect = 2.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 811 GIHETTYNSIMKCDVDIR 864
G+HE Y SI+ CD ++R
Sbjct: 323 GLHELVYQSILACDSELR 340
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 52.8 bits (121), Expect = 6e-08
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +3
Query: 516 AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS 695
A+ R+D+ G+ LT+YL ++++ R Y+ E IV +IKE +CYV+ +F+++M
Sbjct: 182 AVKRVDVGGKLLTNYLKEVISYRKYNMME--ETYIVNEIKESVCYVSQNFKEDMEICHEK 239
Query: 696 --SSLEKSYELPD 728
S LE Y LPD
Sbjct: 240 PRSKLEICYALPD 252
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 39.9 bits (89), Expect = 5e-04
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 298 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 477
+PV L +RE TQ FE P +A + ++ LYA G G+V+D G +
Sbjct: 147 YPVCLVIPTYWSLYDRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKT 206
Query: 478 HTVPIYEG 501
PI +G
Sbjct: 207 DITPILDG 214
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 32.3 bits (70), Expect = 0.093
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 374 HSTRPPCTSPSK-PCSRCTRPV-VPPV-SCWTPATVSPTPCPSTRDTHPPRHPASGLSRS 544
HS PP +P C RP VP V S W P ++ P + PP P +
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQV 194
Query: 545 RPHRLPH 565
P+RLPH
Sbjct: 195 HPNRLPH 201
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +1
Query: 265 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 408
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 65 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 208
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 162 PTYESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 1
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
Score = 29.1 bits (62), Expect = 0.87
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = +2
Query: 365 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHPPRHPASGLSRS 544
C+ ++ PP T S S P VPP S T +T P P ST T +P S S
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTS--TSSTSIPIPPTSTSSTDTNSNPLPTTSTS 171
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = +2
Query: 365 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHPPRHPASGLSRS 544
C+ ++ PP T S S P VPP S T +T P P ST T P S S
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTS--TSSTSIPIPPTSTSSTDTNSSPLPTTSTS 228
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = +2
Query: 368 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHPPRHPAS 529
S ++ P S S C+ T +PP T P ST T P PAS
Sbjct: 324 STGTSSSPLPSTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS 375
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 29.1 bits (62), Expect = 0.87
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 522 GWRGGCVSLVDGHGVGDTVAGVQHDTGGTTGR 427
G RGG G G GDTV GG GR
Sbjct: 128 GGRGGRYGSSGGRGAGDTVVSRSSGAGGARGR 159
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 410 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHPPR 517
PC+ + PPV+C TP P C + H P+
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHPQ 656
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 443 PVSCWTPATVSPTPCPSTRDTHPPR 517
P S TP + T P+T DTHPP+
Sbjct: 280 PQSGSTPQMQNTTSQPTTHDTHPPK 304
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 407 KPCSRCTRPVVPPVSCWT---PATVSPTPCPSTRDTHPPRHPASGLSRSR 547
KP S+ TRP +P + T P P P + DT R+P+ S+S+
Sbjct: 65 KPSSKATRPYIPSYTRLTYSVPPLPIPPPSEQSLDTIIYRNPSVSSSQSQ 114
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 389 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 496
P T+P P T PV P S P+ P P PS+
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSS 1071
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.5
Identities = 20/73 (27%), Positives = 26/73 (35%)
Frame = +2
Query: 386 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHPPRHPASGLSRSRPHRLPH 565
P T P +P S + P P +V P P PP P L S +P+
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 566 EDPHRARLLVHYH 604
R+ LL H
Sbjct: 1746 PG-DRSALLQQIH 1757
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 410 PCSRCTRPVVPPVSCWTPATVSPTPCPST 496
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 670 RRWPPL--HPAAPSRSLTNFPTVRSSPSETKDS-LPRGSLPTSFL 795
+ WP L HP P R P++ + P +T S P P SF+
Sbjct: 112 KHWPSLKPHPLPPKRVSLGIPSISNPPVDTVISDSPTSPHPPSFV 156
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 488 PSTRDTHPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRA 625
PS R PP PA+ SR P RL++ H++ RA
Sbjct: 95 PSLRSLSPPATPATPRSRIEGESQTSAIPQTDRLILENHQQEFERA 140
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 458 TPATVSPTPCPSTRDTHPPRHPASGLSRSRP 550
TPA +P P P+ + PP S +S S P
Sbjct: 728 TPAPPTPAPTPAVKHHPPPPPVRSSISPSMP 758
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 777 SSNLVLGYGSLRHPRDNI*LHHEVRRG 857
S+N + GY +L HPR+ I + + RG
Sbjct: 467 SNNSLYGYSTLLHPRNPICVRQRIGRG 493
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 165 SPTYESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 49
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 389 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHPPRHPASGLSRSRPHRLPHE 568
P +P+ P + P+ PP+ PA P P P+ P PA + LP +
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMPA-APPLP-PAAPAPPPAPAPAPAAPVASIAELPQQ 497
Query: 569 DPHRARLLVHYHRRAG 616
D RA L+ G
Sbjct: 498 D-GRANLMASIRASGG 512
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +2
Query: 386 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHPPRHPASGLSRSRPHRLP 562
PP PS P P +PP A ++P P P+ PP PA+ P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPP-----SAPIAP-PLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 386 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 493
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPBC409.20c |psh3||ER chaperone SHR3 homologue
Psh3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 26.6 bits (56), Expect = 4.6
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +3
Query: 477 PHRAHLRGIRTPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 656
P HL + H ++ LAG L+++ GY + +RE D++E+
Sbjct: 135 PRNMHLSVLAASHVLVEFLLAGV----ILIQLGYVFGYHVQSIQQREYAEDMREQELAEK 190
Query: 657 LDFEQEMATAAS 692
E E AT S
Sbjct: 191 AKLESESATTQS 202
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 686 SGGHLLLEVKSDVAQLLLDVTHDFPLG 606
SGGHL+ D+ + + DVTHDF +G
Sbjct: 765 SGGHLV-----DMMKNISDVTHDFAMG 786
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 307 LLTEAPLNPKANREKMTQIMFETFN 381
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 173 VPRLLRTSPSVPYRPSRPDGGAFPRSRGTR 84
+ +L+ +PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 464 ATVSPTPCPSTRDTHPPRHPASGLSRSRP 550
A +SP P PS D P +PA + P
Sbjct: 1398 AAISPNPMPSAHDLLPTSNPAELFTNISP 1426
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 679 PPLHPAA-PSRSLTNFPTVRSSPSET 753
PP HPA+ SR + ++ TV+SSPS T
Sbjct: 75 PPQHPASINSRRVASY-TVQSSPSRT 99
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.8 bits (54), Expect = 8.1
Identities = 24/96 (25%), Positives = 41/96 (42%)
Frame = -2
Query: 288 GDTQLIVEGMMQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTYESFCPIPTITP*WRG 109
GD Q++ +Q + SQ+ T+ Y+ +L + TY+S + TITP
Sbjct: 393 GDHQIVTTSFVQTTTHGSQVETLT----YVTTLTETIL---TTTYDSHTFLTTITPSPSN 445
Query: 108 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 1
+ NT +SS ++ P S N +S +
Sbjct: 446 SISYTNNTFIPSSSIKSSIVYSVTPTSAENYTSSEA 481
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 428 RPVVPPVSCW-TPATVSPTPCPSTRDTHPPRHPAS 529
RPV P TP T+SP P R+ P H S
Sbjct: 49 RPVYTPTRTEITPVTLSPIPITPVREFQPYLHEIS 83
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,885,821
Number of Sequences: 5004
Number of extensions: 85670
Number of successful extensions: 398
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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