Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1347X
(455 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41) 75 2e-14
SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 67 7e-12
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 66 1e-11
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-08
SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24) 45 3e-05
SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17) 45 3e-05
SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 41 4e-04
SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11) 40 7e-04
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 40 0.001
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 38 0.003
SB_53172| Best HMM Match : ABC_tran (HMM E-Value=5.4e-40) 37 0.007
SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.007
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.012
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.012
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.021
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.021
SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.028
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.028
SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41) 35 0.037
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 35 0.037
SB_6941| Best HMM Match : ABC_tran (HMM E-Value=0.023) 34 0.048
SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.064
SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 34 0.064
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 34 0.064
SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28) 33 0.15
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.45
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.60
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 30 0.79
SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0) 30 1.0
SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24) 29 1.4
SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0) 29 1.4
SB_31683| Best HMM Match : ApoC-I (HMM E-Value=1.8) 29 2.4
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 28 3.2
SB_28281| Best HMM Match : Pou (HMM E-Value=0) 28 4.2
SB_20716| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_25617| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_58569| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_53106| Best HMM Match : PLAT (HMM E-Value=0) 27 9.7
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 27 9.7
SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36) 27 9.7
SB_45871| Best HMM Match : ABC_tran (HMM E-Value=2.5e-08) 27 9.7
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 27 9.7
>SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 82.6 bits (195), Expect = 1e-16
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +3
Query: 12 IEFRDVNFKYVNGKPIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIFI 191
+ F DV+F+Y+ G+ I + LSFSIP ST+VRLL+RFF+PQ G + +
Sbjct: 411 VTFEDVSFQYIEGQRILDGLSFSIPAGKKVAIVGGSGSGKSTIVRLLFRFFDPQGGRVLV 470
Query: 192 NGQNIRDVDLVSLRKAIAVVP 254
GQ+IRD L SLRK + VVP
Sbjct: 471 AGQDIRDFSLESLRKVVGVVP 491
Score = 66.5 bits (155), Expect = 1e-11
Identities = 23/48 (47%), Positives = 40/48 (83%)
Frame = +2
Query: 254 EDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDT 397
++CVLFH+++++N++YG + + +V+ A+R+AE+HDA+L PKGYDT
Sbjct: 492 QECVLFHNSVYYNINYGRVQATEHEVHEAARMAEIHDAILRMPKGYDT 539
>SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41)
Length = 336
Score = 75.4 bits (177), Expect = 2e-14
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = +2
Query: 254 EDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGG 433
+D VLF++ I N+ YG L V A++ A++H+ +LT+P+GY++ VGERGLKLSGG
Sbjct: 223 QDTVLFNNDIRFNVRYGRLEADDAAVEEAAQAADIHNRILTFPEGYNSLVGERGLKLSGG 282
Query: 434 EKQRVGI 454
EKQRV I
Sbjct: 283 EKQRVAI 289
Score = 53.6 bits (123), Expect = 7e-08
Identities = 28/68 (41%), Positives = 39/68 (57%)
Frame = +3
Query: 51 KPIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIFINGQNIRDVDLVSL 230
KP+ N+SF++ ST++RLLYRF++ SG I I+GQ+I V SL
Sbjct: 155 KPVLKNISFTVFPGQTLALVGNSGGGKSTIIRLLYRFYDVGSGCISIDGQDISKVTSKSL 214
Query: 231 RKAIAVVP 254
R+ I VVP
Sbjct: 215 RQVIGVVP 222
>SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 EDCVLFHDTIFHNLHYG--DLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLS 427
++ VLF +I N+ YG DL+ + E V SRLA H V PKGYDTE GE+GL+LS
Sbjct: 435 QEPVLFARSIKKNIAYGVEDLADNPETVEHVSRLANAHSFVSGMPKGYDTETGEKGLQLS 494
Query: 428 GGEKQRVGI 454
GG+KQR+ I
Sbjct: 495 GGQKQRIAI 503
Score = 35.9 bits (79), Expect = 0.016
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +3
Query: 54 PIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIFINGQNIRDVDLVSLR 233
P+ +N+SF + ST + LL +EP G + I+ ++D+D L
Sbjct: 368 PVLDNVSFMVEPGQVVALVGPSGGGKSTCINLLEHLYEPTGGEVLIDAVPVKDLDHYYLH 427
Query: 234 KAIAVV 251
+++V
Sbjct: 428 NKVSLV 433
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 66.9 bits (156), Expect = 7e-12
Identities = 30/68 (44%), Positives = 45/68 (66%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
S++ LF TI N+ YG ++ ++ A+++A HD + PKGY+T VGE+G +LSG
Sbjct: 716 SQEPALFATTIAENIRYGQDGVTQAEIEQAAKMANAHDFITKLPKGYETVVGEQGSQLSG 775
Query: 431 GEKQRVGI 454
G+KQRV I
Sbjct: 776 GQKQRVAI 783
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSK--SREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKL 424
S++ VLF +I N+ YGD S+ S ++ A++ A +H+ + PKGYDTEVG++G +
Sbjct: 749 SQEPVLFGYSIAQNIAYGDNSREVSMAEIETAAKAANIHNFICGLPKGYDTEVGDKGTLI 808
Query: 425 SGGEKQRVGI 454
SGG+KQR+ I
Sbjct: 809 SGGQKQRIAI 818
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/68 (39%), Positives = 46/68 (67%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
S++ +LF T+ N+ YG ++ ++ A+++A HD + P+GY+T VGERG ++SG
Sbjct: 199 SQEPILFATTVAENIRYGREGITQAEIEKATKMANAHDFIRNLPQGYNTVVGERGAQMSG 258
Query: 431 GEKQRVGI 454
G+KQR+ I
Sbjct: 259 GQKQRIAI 266
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 9 TIEFRDVNFKYVN--GKPIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGN 182
T++ R V FKY + LS + ST V LL RF++P+ G
Sbjct: 666 TVQVRSVRFKYPTRPNVKVLRGLSLEVNQGQTLALVGPSGCGKSTTVSLLERFYDPEDGE 725
Query: 183 IFINGQNIRDVDLVSLRKAIAVV 251
+ I+ N+R ++L LR I +V
Sbjct: 726 MAIDNANVRQLNLKWLRSKIGIV 748
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 55.2 bits (127), Expect = 2e-08
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +2
Query: 257 DCVLFHDTIFHNLHYGDLSK--SREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
D +LF +I N+ YG S S + + A+R A + + ++P GYDT VGERG LSG
Sbjct: 1133 DPILFSCSIAENIAYGAASSEVSMDAIKDAARQANAANFIESFPNGYDTIVGERGQMLSG 1192
Query: 431 GEKQRVGI 454
G++QR+ I
Sbjct: 1193 GQRQRIAI 1200
>SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24)
Length = 169
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 12 IEFRDVNFKYVNGK-PIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIF 188
I F DV F+Y + P+++ S I +T ++L+ R ++ G I
Sbjct: 66 IRFEDVTFRYGRHEAPLYDRFSARIAPGERVGLVGHSGSGKTTFIKLIQRLYDVNGGRIA 125
Query: 189 INGQNIRDVDLVSLRKAIAVV 251
I+GQ+I V SLR IA+V
Sbjct: 126 IDGQDIAQVRQASLRSQIAIV 146
>SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17)
Length = 398
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
++D VLF ++ HNL K E+++ A + +L DAVL +P G DT+V E G S
Sbjct: 213 AQDPVLFSGSLRHNLDPVSQYKD-EELWTALKEVQLGDAVLEFPDGLDTKVTESGNNFSV 271
Query: 431 GEKQRV 448
G++Q +
Sbjct: 272 GQRQLI 277
>SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +2
Query: 272 HDTIFHNLHYG---DLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQ 442
H T+ N+ +G D+ K + + A + L + + + P G DTE+GE G+ LSGG+K
Sbjct: 141 HATVKENILFGKPYDVDKYSDVINACA----LREDLQSLPAGDDTEIGENGVNLSGGQKA 196
Query: 443 RVGI 454
RVG+
Sbjct: 197 RVGL 200
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 386 GYDTEVGERGLKLSGGEKQRV 448
G D EVGERG S G++Q V
Sbjct: 511 GLDAEVGERGRNFSAGQRQLV 531
>SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 44.0 bits (99), Expect = 6e-05
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 12 IEFRDVNFKYVNGKP--IFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNI 185
I F DV F Y + + + LSF I ST++ L+ RF++P +GNI
Sbjct: 158 IVFDDVRFSYPSREDTEVLKALSFKINPGETVALVGPSGGGKSTVISLIERFYDPMTGNI 217
Query: 186 FINGQNIRDVDLVSLRKAIAVV 251
I +I +DL RK IA+V
Sbjct: 218 RIGDTDISLLDLAWYRKKIALV 239
>SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQR 445
+F D+I +N+ G +E++ A+ +A + D + +P Y+T++G G+ +S G+KQR
Sbjct: 310 IFSDSIANNIAIGVDIIDKERLDYAANVANIKDFIDDYPLRYNTKIGSEGVGISTGQKQR 369
Query: 446 V 448
+
Sbjct: 370 L 370
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/81 (19%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 12 IEFRDVNFKYVNGKP-IFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIF 188
I +D++F+Y+ + L+ +IP +T+++LL +F+EP G++
Sbjct: 224 IIIKDLSFRYLGSDTNVLKELNMTIPAKKITAIVGTSGSGKTTLMKLLLKFYEPSEGDVL 283
Query: 189 INGQNIRDVDLVSLRKAIAVV 251
+ ++ ++ + R + V
Sbjct: 284 LGKSSLSNLSQKAWRDHVGSV 304
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 41.1 bits (92), Expect = 4e-04
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGD--LSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKL 424
SE +F DT N+ +G+ + K + V A L +L D V PKG + +G+RG+ L
Sbjct: 498 SETPWVFSDTFRENILFGNNYIKKKYDHVIA---LCDLVDDVKRLPKGDLSMIGQRGVSL 554
Query: 425 SGGEKQRVGI 454
SGG++ R+ +
Sbjct: 555 SGGQRSRLSL 564
>SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11)
Length = 406
Score = 40.3 bits (90), Expect = 7e-04
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
S C++ + I N Y D +K V A +L +T+P G +E+GERG+ LSG
Sbjct: 145 SGSCLVVVENITFNAQY-DATKYERVVDACDLTVDL----MTFPNGDLSEIGERGVALSG 199
Query: 431 GEKQRVGI 454
G++ RV +
Sbjct: 200 GQRARVSL 207
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQR 445
+F T+ N+ +G L + + R +L + +L +P G + +G+RG+ LSGG++ R
Sbjct: 632 IFSGTVRENVLFG-LPYDEAKYWRVLRACDLEEDMLHFPYGDLSVIGQRGISLSGGQRSR 690
Query: 446 VGI 454
V +
Sbjct: 691 VSL 693
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 380 PKGYDTEVGERGLKLSGGEKQRVGI 454
P G TE+GE+G+ LSGG+KQRV +
Sbjct: 386 PSGDSTEIGEKGINLSGGQKQRVNL 410
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 TATIEFRDVNFKYVNGKPI-FNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSG 179
T I+ ++ +Y P+ ++S I S++ L+R E G
Sbjct: 898 TGNIKIDSLDLRYRESLPLALKDISCDIQPGEKIGIVGRTGAGKSSLSLALFRMLEAAGG 957
Query: 180 NIFINGQNIRDVDLVSLRKAIAVVP 254
I I+G +I + L LR + ++P
Sbjct: 958 KIVIDGVDIAKIGLHDLRSRLTIIP 982
>SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1116
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
S++ +F T+ N+ + + E+ +L D +P G +E+GERG+ +SG
Sbjct: 389 SQEPWIFQGTVRENIMFNSFYDA-ERYQKVVEACDLKDDFKAFPNGDLSEIGERGIAMSG 447
Query: 431 GEKQRVGI 454
G++ RV +
Sbjct: 448 GQRARVSL 455
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 380 PKGYDTEVGERGLKLSGGEKQRVGI 454
P G TE+GERG+ LSGG+KQRV +
Sbjct: 657 PAGDMTEIGERGINLSGGQKQRVNL 681
Score = 34.3 bits (75), Expect = 0.048
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 IEFRDVNFKYVNGKP-IFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIF 188
I+ D + +Y P + N+S I ST+ L+R E G I
Sbjct: 1332 IQIEDFDLRYRANLPLVLKNISVDIQPGEKIGIVGRTGAGKSTLTLALFRILESAGGRIV 1391
Query: 189 INGQNIRDVDLVSLRKAIAVVP 254
++ +I + L LR ++ ++P
Sbjct: 1392 VDDLDISKMGLQDLRSSLTIIP 1413
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 12 IEFRDVNFKY-VNGKPIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIF 188
I D +F + V G+P +N++ +IP ST++ L E +G ++
Sbjct: 547 IHVDDGSFSWDVTGQPTLHNINLNIPDGSLVAVVGQVGCGKSTLLSALLGETEKVTGEVY 606
Query: 189 ING 197
+ G
Sbjct: 607 VKG 609
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 266 LFHDTIFHNLHYG---DLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGE 436
+F TI N+ + D +K V A +L +T+P G +E+GERG+ LSGG+
Sbjct: 854 IFQGTIQENITFNAQYDATKYERVVDACDLTVDL----MTFPNGDLSEIGERGIALSGGQ 909
Query: 437 KQRVGI 454
+ RV +
Sbjct: 910 RARVSL 915
>SB_53172| Best HMM Match : ABC_tran (HMM E-Value=5.4e-40)
Length = 665
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
S++ +F T+ N+ + + E+ +L + +P G +E+GERG+ +SG
Sbjct: 257 SQEPWIFQGTVRENIIFNS-TYDAERYQKVVEACDLKEDFKAFPNGDLSEIGERGIAMSG 315
Query: 431 GEKQRVGI 454
G++ RV +
Sbjct: 316 GQRARVSL 323
>SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 37.1 bits (82), Expect = 0.007
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYG-DLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLS 427
S+ +F T+ N+ +G + + SR R L + P+G T VGE+GL LS
Sbjct: 448 SQTAWVFSGTVRQNVMFGQEYNDSRYD--KVIRACALDRDIELMPEGDHTLVGEKGLALS 505
Query: 428 GGEKQRVGI 454
GG+K RV +
Sbjct: 506 GGQKARVNL 514
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 36.3 bits (80), Expect = 0.012
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 IEFRDVNFKYVNGKP-IFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIF 188
I F +++F Y P + +N++ I S+++ L+R EP+ G I
Sbjct: 35 ITFDNMSFSYHQSLPEVLHNVTCVIKPSEKVGVVGRTGAGKSSLLSTLFRLAEPK-GLID 93
Query: 189 INGQNIRDVDLVSLRKAIAVVP 254
I+G NIR + L LR ++++P
Sbjct: 94 IDGINIRKLGLKDLRSKLSIIP 115
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 36.3 bits (80), Expect = 0.012
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
SE +F DT N+ +G ++ + L +L D + PKG + +G+RG+ LS
Sbjct: 468 SETPWVFSDTFRENILFGKTYIKKKYDHVIE-LCDLVDDIRRLPKGDLSMIGQRGVTLSR 526
Query: 431 GEKQRVGI 454
G++ RV +
Sbjct: 527 GQRSRVSL 534
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 35.5 bits (78), Expect = 0.021
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSREQVYAASRLA-ELHDAVLTWPKGYDTEVGERGLKLSGGEKQ 442
+F T+ N+ +G R +Y A+ LA +L + ++P T +GERG LSGG++
Sbjct: 559 VFSGTVRSNILFGKRYDPR--LYDATLLACDLRKDINSFPDRDATVIGERGTMLSGGQRT 616
Query: 443 RVGI 454
RV +
Sbjct: 617 RVAL 620
Score = 34.7 bits (76), Expect = 0.037
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 24 DVNFKYVN-GKPIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIFINGQ 200
DV FKY + G + +S I S++VR +YR EPQ G I ++
Sbjct: 1175 DVTFKYHDDGHEVLKRISVHIKDGQKVGVVGRTGAGKSSLVRAIYRMPEPQ-GAIVVDDV 1233
Query: 201 NIRDVDLVSLRKAIAVV 251
++ +++ R AI+V+
Sbjct: 1234 DLGSINVQRARSAISVI 1250
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
S+ +F ++ N+ +G + + A D L +P G +T VGE+G+ LSG
Sbjct: 98 SQQAWIFSGSVRENILFGKEYEEAKYWRVIKACAMERDMRL-FPNGDETLVGEKGVALSG 156
Query: 431 GEKQRVGI 454
G+K R+ +
Sbjct: 157 GQKARINL 164
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 353 ELHDAVLTWPKGYDTEVGERGLKLSGGEKQRV 448
+L +AV P G +TE+ E G S G++Q V
Sbjct: 1001 QLKEAVDELPDGIETELAEGGSNFSVGQRQLV 1032
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQR 445
+F T+ N+ +G + A ++ +L + +PKG + +G+RG+ LSGG++ R
Sbjct: 531 VFSGTVRENITFGK-EYDKAAYEKAIKVCDLAKDINRFPKGDLSCIGQRGVSLSGGQRAR 589
Query: 446 VGI 454
V +
Sbjct: 590 VSL 592
Score = 30.7 bits (66), Expect = 0.60
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
++D VLF T+ NL D +E ++AA +L + V P ++GE G S
Sbjct: 1148 TQDPVLFGGTLRRNLDPFDKFTDQE-IWAALESVQLLNTVRALPDQLMYQLGESGSTFSV 1206
Query: 431 GEKQ 442
GE+Q
Sbjct: 1207 GERQ 1210
>SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 35.1 bits (77), Expect = 0.028
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQR 445
+F T+ N+ + E+ +L +++ P+G T +GERG LSGG+K R
Sbjct: 146 VFSGTVRENILFSK-PYDEERYQRTLEACDLAKDIVSLPQGDATILGERGASLSGGQKAR 204
Query: 446 VGI 454
V +
Sbjct: 205 VNL 207
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 35.1 bits (77), Expect = 0.028
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQR 445
+F T+ N+ +G + ++ L + V PKG + +G+RG+ LSGG++ R
Sbjct: 553 VFSGTLRENILFGK-EYDEAKYKKVIKVCSLEEDVRRLPKGDLSMIGQRGVSLSGGQRSR 611
Query: 446 VGI 454
V +
Sbjct: 612 VSL 614
>SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41)
Length = 1515
Score = 34.7 bits (76), Expect = 0.037
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 278 TIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQRVGI 454
TI N+ +G E+ + L + +P+G T +GERG LSGG++ RV +
Sbjct: 645 TIRENITFGK-QMEEERYNKVLEVCSLVSDLSLFPRGDLTVIGERGASLSGGQQSRVSL 702
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 34.7 bits (76), Expect = 0.037
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSR--EQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEK 439
LF TI N+ + + K QV A +L E + +P G + VGERG+ LSGG++
Sbjct: 485 LFSGTIKENIIFHERYKDDWYRQVVKACQLVE---DLQKFPDGDEMVVGERGVVLSGGQQ 541
Query: 440 QRVGI 454
RV +
Sbjct: 542 ARVSL 546
>SB_6941| Best HMM Match : ABC_tran (HMM E-Value=0.023)
Length = 92
Score = 34.3 bits (75), Expect = 0.048
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSK--SREQVYAASRLAELHDAVLTWPK 385
S++ VLF +I N+ YGD S+ S +++ A+R A +HD + PK
Sbjct: 46 SQEPVLFGYSIAQNIAYGDNSREVSMKEIETAARAANIHDFISGLPK 92
>SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 672
Score = 33.9 bits (74), Expect = 0.064
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +3
Query: 54 PIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIFINGQNIRDVDLVSLR 233
P+ L+F I ST+ L+R E SG I I+ +I + L LR
Sbjct: 436 PVIKKLTFEINSGEKIGIVGRTGAGKSTLSLALFRILERASGKIVIDNIDINKIGLQDLR 495
Query: 234 KAIAVVP 254
+ ++P
Sbjct: 496 SRLTIIP 502
>SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 674
Score = 33.9 bits (74), Expect = 0.064
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
S+ +++ T+ HN+ +G A D L +G +T VGERG+ LSG
Sbjct: 419 SQQAWVYNSTLRHNILFGKEYDEHRYNDVIKACALDKDFELL-SEGDETLVGERGVSLSG 477
Query: 431 GEKQRVGI 454
G++ R+ +
Sbjct: 478 GQRARISL 485
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 33.9 bits (74), Expect = 0.064
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
S+ +++ T+ HN+ +G A D L +G +T VGERG+ LSG
Sbjct: 88 SQQAWVYNSTLRHNILFGKEYDEHRYNDVIKACALDKDFELL-SEGDETLVGERGVSLSG 146
Query: 431 GEKQRVGI 454
G++ R+ +
Sbjct: 147 GQRARISL 154
>SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28)
Length = 951
Score = 32.7 bits (71), Expect = 0.15
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2
Query: 398 EVGERGLKLSGGEKQRVGI 454
++GERG+ LSGG+KQR+ +
Sbjct: 158 QIGERGINLSGGQKQRISL 176
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 48 GKPIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLYRFFEPQSGNIFINGQNIRDVDLVS 227
G +NL F + S++V L++ P G I I+G +I+ + L
Sbjct: 791 GPKALHNLYFEVKPRERISIVGKAGAGKSSLVAALFQM-PPPEGEISIDGHDIKCLYLQE 849
Query: 228 LRKAIAVVP 254
LRK ++VVP
Sbjct: 850 LRKHLSVVP 858
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 31.1 bits (67), Expect = 0.45
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSREQVY-AASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQ 442
++ T+ N+ +G K ++ Y R +L + +P T +GE G+ LSGG++
Sbjct: 487 VYSGTVRENVLFG--KKYQQWKYQVVVRACDLEKDLNEFPDRDLTTIGEHGVLLSGGQRT 544
Query: 443 RVGI 454
R+G+
Sbjct: 545 RIGL 548
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 30.7 bits (66), Expect = 0.60
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 132 STMVRLLYRFFEPQSGNIFINGQNIRDVDLVSLRKAIAVVP 254
+T++ +L F P SGN +NG +I D D+ +R ++ + P
Sbjct: 349 TTLMSMLTGLFPPTSGNAVVNGCSITD-DISGVRSSLDLCP 388
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 30.3 bits (65), Expect = 0.79
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQR 445
+F+ ++ N+ +G L E+ L + G T +GERG+ LSGG++ R
Sbjct: 483 IFNGSVRENITFG-LPYDEEKYGRIIDACALRKDFELFSNGDLTVIGERGVALSGGQRAR 541
Query: 446 VGI 454
V +
Sbjct: 542 VSL 544
>SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 2675
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 233 PQANQVHVPDVLSVDEYVPGLRFEESVQQS 144
P QVHV +L+ DE PG+ +E S+ +S
Sbjct: 184 PTTEQVHVVGLLTADEPNPGIEYEFSLPKS 213
>SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24)
Length = 569
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 395 TEVGERGLKLSGGEKQRV 448
T VGERG+ LSGG+K RV
Sbjct: 243 TLVGERGVALSGGQKARV 260
>SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 301
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSG 430
++D V+F ++ NL + +E ++ A R +L V P D +GE G LS
Sbjct: 141 TQDPVVFAGSLRKNLDPVNAFNDQE-LWTALRNVQLAGCVSCLPGKLDYRLGEGGAGLSM 199
Query: 431 GEKQ 442
GEKQ
Sbjct: 200 GEKQ 203
>SB_31683| Best HMM Match : ApoC-I (HMM E-Value=1.8)
Length = 804
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 226 LTRSTSRMF-CPLMNMFPDCGSKNRYNSR---TIVDFPEPEPPTM 104
L S +M+ + N+F SK R++S TI+D P+PEP M
Sbjct: 458 LKLSVDKMYLAAIQNLFKAPVSKRRHSSDLPDTILDLPDPEPEQM 502
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 251 SEDCVLFHDTIFHNLH-YGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLS 427
++D VLF T+ NL +G + +++++A +L + V P ++GE G S
Sbjct: 913 TQDPVLFGGTLRRNLDPFGKFTD--QEIWSAIESVQLLNTVRALPDQLMYQLGESGSTFS 970
Query: 428 GGEKQ 442
GE+Q
Sbjct: 971 VGERQ 975
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 311 SKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQRV 448
+K+R V + S A +H T+ GYD E + SGG K+ +
Sbjct: 2203 NKTRIGVASYSSSANIHFNFNTYNTGYDVENAINAISFSGGAKRNL 2248
>SB_28281| Best HMM Match : Pou (HMM E-Value=0)
Length = 250
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 208 RMFCPLMNMFPDCGSKNRYNS--RTIVDFPEPEPPTMPILAPAGIEKLRLLNIGFPFTYL 35
RM C + +P+ GS Y + + P+PP MP G + RL+N+ +
Sbjct: 2 RMACAVS--YPNEGSYQPYQTPNHEAMSMYGPQPPQMPSATHMGKMEPRLMNVNVSSAF- 58
Query: 34 KFTSLNSIVAV 2
S+NSI +
Sbjct: 59 GLNSVNSITPI 69
>SB_20716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2
Query: 151 NSRTIVDFPEPEPPTMPILAPAGIEKLRLLNIGFPFTYLKFTS 23
N RT +D P P P APA + R NIG Y F++
Sbjct: 255 NLRTRLDLLLPYRPASPKTAPALSQPSRCFNIGHKVWYQDFSA 297
>SB_25617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 136 QWSDCCTDSSNRSPGTYSSTDRTSGTWTWLA*GRPSQSFRGLRAVPRHDIP 288
++S D +N PGTYS + T W + G Q+ + L + + P
Sbjct: 58 EYSGPVPDPNNSPPGTYSKIGTLNATKLWTSLGNRIQNVQTLSFILENSRP 108
>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2630
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Frame = -1
Query: 332 TPAPGTCSGLRSAGCG--ISCRGTARSPRNDC----DGLPQANQVHVPD 204
+PAPG+CS L + SC +P ++C + AN PD
Sbjct: 483 SPAPGSCSFLNNCSSANYTSCANATAAPNSNCSLSTNSTASANTTAAPD 531
>SB_58569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 311 SGLRSAGCGISCRGTARSPRNDCDGLPQANQVHVPDVLSV 192
SGLR CG C G +ND + L + H ++ +
Sbjct: 65 SGLRPLDCGADCLGIMIDDKNDMELLKDVIEKHKGQIIKL 104
>SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 311 SGLRSAGCGISCRGTARSPRNDCDGLPQANQVHVPDVLSV 192
SGLR CG C G +ND + L + H ++ +
Sbjct: 602 SGLRPLDCGADCLGIMIDDKNDMELLKDVIEKHKGKIIKL 641
>SB_53106| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1790
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 179 EHIHQRTEHPGRGPG*LEEGHRSRSEDCVLFHDTIFHNLHYGDLSKSR 322
+H+ E PGRG E R++ +D V+F + + GD KSR
Sbjct: 2 DHVRLSQEGPGRGVFLEEVEVRAKDKDPVIFPCQCWLDDSEGDAQKSR 49
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 356 LHDAVLTWPKGYDTEVGERGLKLSGGEKQRV 448
L + V P G +TE+ E+G S G++Q V
Sbjct: 917 LRETVDKLPDGIETELAEKGSNFSVGQRQLV 947
>SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36)
Length = 380
Score = 26.6 bits (56), Expect = 9.7
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +2
Query: 266 LFHDTIFHNLHYGDLSKSREQVYAASRLAELHDAVLTWPKGYDTEVGERGLKLSGGEKQR 445
+F TI N+ +G S A HD P+ T +G RG+ LSGG+ R
Sbjct: 220 IFTGTIRENITFGLKFDSLFYKQVVDACALEHDFRFL-PERDLTVIGARGMTLSGGQCSR 278
Query: 446 VGI 454
+ +
Sbjct: 279 ISL 281
>SB_45871| Best HMM Match : ABC_tran (HMM E-Value=2.5e-08)
Length = 435
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 356 LHDAVLTWPKGYDTEVGERGLKLSGGEKQRV 448
L + V P G +TE+ E+G S G++Q V
Sbjct: 33 LRETVDKLPDGIETELAEKGSNFSVGQRQLV 63
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +2
Query: 185 IHQRTEHPGRGPG*LEEGHRSRSEDCVLFHDTIFHNL-----HYGDLSKSREQVYAASRL 349
+H++ + R + G R + DCV+ +DT H+ Y +LS++ + A
Sbjct: 116 LHRKLKQKSRDGSESDRGKRRFNGDCVIENDTTTHSCAVSTSAYEELSRAPSS-HTADFT 174
Query: 350 AELHDAVLTWPKGYD 394
+ + L WP Y+
Sbjct: 175 YKGYPVNLEWPLDYE 189
>SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 781
Score = 26.6 bits (56), Expect = 9.7
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +3
Query: 3 TATIEFRDVNFKYVNG--KPIFNNLSFSIPXXXXXXXXXXXXXXXSTMVRLLY--RFFEP 170
T I F+D+N K +G K + ++ I +T + L ++
Sbjct: 192 TVDITFKDLNLKLNSGTKKTVLMGVTGKIKSGEVTAVMGPSGAGKTTFLNTLSGKAYYGT 251
Query: 171 QSGNIFINGQNIRDVDL 221
+ G IFING+ D+D+
Sbjct: 252 RGGEIFINGKKEDDLDM 268
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,626,435
Number of Sequences: 59808
Number of extensions: 247397
Number of successful extensions: 938
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 920703675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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