Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1346
         (841 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    99   1e-22
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    30   0.076
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          27   0.94 
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   2.9  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   2.9  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 99.1 bits (236), Expect = 1e-22
 Identities = 44/81 (54%), Positives = 55/81 (67%)
 Frame = +1

Query: 259 VHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYG 438
           VHY GTL DGT FDSSR R +PF+F +GK  VI  W  GV  M  G+   L C+P+YAYG
Sbjct: 25  VHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYG 84

Query: 439 ASGSPPKIPPNATLQFEIEMI 501
           + G P  IPPNA L F++E++
Sbjct: 85  SRGHPGVIPPNARLTFDVELL 105


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 30.3 bits (65), Expect = 0.076
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -2

Query: 771 LGW*LTGISHLSKISLELFLYLRIYCVRYLRRVKM*LFSDRIFC--YHLAVS 622
           +GW +T   H   ++ ++FL++R +C+     V + +  DR F   Y L VS
Sbjct: 135 VGWRITVQWHAGNVACKVFLFMRAFCLYLSSNVLVCVSLDRCFAVIYPLRVS 186


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = +1

Query: 382 TMKKGEVCILTCAPEYAYGASGS--PPKIPPNATLQFEIEMIDWNWKILVLPR 534
           T  K   C  TC   + Y +  S   P   P A    E   +DW  KIL LPR
Sbjct: 200 TKTKNGCCRKTCGTGWKYRSISSLHAPPSHPGAHRAAE-PRLDWRIKILPLPR 251


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 472 ATLQFEIEMIDWNWKILVLPRTKAYCA 552
           A  + E+ M+DW  K+L LP+    C+
Sbjct: 120 ACTELEVVMLDWLGKMLDLPKEFLACS 146


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 472 ATLQFEIEMIDWNWKILVLPRTKAYCA 552
           A  + E+ M+DW  K+L LP+    C+
Sbjct: 151 ACTELEVVMLDWLGKMLDLPKEFLACS 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 943,659
Number of Sequences: 2352
Number of extensions: 22584
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)