Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1346
(841 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 128 3e-30
At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase / F... 123 2e-28
At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type pept... 97 2e-20
At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) / ... 78 8e-15
At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) / ... 75 6e-14
At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) / immuno... 70 2e-12
At4g25340.1 68417.m03647 immunophilin-related / FKBP-type peptid... 69 5e-12
At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase, pu... 63 2e-10
At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase, pu... 63 2e-10
At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identi... 56 2e-08
At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type pept... 52 5e-07
At3g21640.1 68416.m02729 FKBP-type peptidyl-prolyl cis-trans iso... 50 3e-06
At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type pept... 49 3e-06
At4g39710.1 68417.m05620 immunophilin, putative / FKBP-type pept... 43 2e-04
At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type pept... 43 2e-04
At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-proly... 38 0.011
At5g56490.1 68418.m07050 FAD-binding domain-containing protein s... 30 1.7
At2g33760.1 68415.m04140 pentatricopeptide (PPR) repeat-containi... 28 6.7
At1g67530.1 68414.m07694 armadillo/beta-catenin repeat family pr... 28 8.9
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 128 bits (310), Expect = 3e-30
Identities = 56/83 (67%), Positives = 65/83 (78%)
Frame = +1
Query: 259 VHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYG 438
VHY GTLLDGTKFDSSRDR PF+F LG+ VI+ W +G+ TMKKGE I T PE AYG
Sbjct: 70 VHYTGTLLDGTKFDSSRDRGTPFKFTLGQGHVIKGWDLGIKTMKKGENAIFTIPPELAYG 129
Query: 439 ASGSPPKIPPNATLQFEIEMIDW 507
+GSPP IPPNATLQF++E+I W
Sbjct: 130 ETGSPPTIPPNATLQFDVELIAW 152
Score = 68.1 bits (159), Expect = 7e-12
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Frame = +1
Query: 268 VGTLLDGTKF---DSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYG 438
+G L DGT + EPFEF + ++ VIE + V MKKGEV ++T +PEYA+G
Sbjct: 307 IGKLQDGTTVFVKKGHEEDEEPFEFKIDEEQVIEGLEKAVMGMKKGEVALITISPEYAFG 366
Query: 439 ASGSPPK---IPPNATLQFEIEMIDW 507
+S S + IPPN+T+ +E+E++ +
Sbjct: 367 SSESKQELAVIPPNSTVYYEVELVSF 392
Score = 54.4 bits (125), Expect = 9e-08
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +1
Query: 259 VHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYG 438
V Y L DGT S + EF + + A V TMK+GE +LT P+Y +G
Sbjct: 186 VKYEARLEDGTIVGKS----DGVEFTVKEGHFCPALSKAVKTMKRGEKVLLTVKPQYGFG 241
Query: 439 ASGSPPK------IPPNATLQFEIEMIDW 507
G P IPPNATLQ ++E++ W
Sbjct: 242 EFGRPASDGLQAAIPPNATLQIDLELVSW 270
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Frame = +3
Query: 528 TKNKGILRHILEAGTGLDSPNDGALVTVELEGRLQGDSKIF-------DQRTVTFSLGEG 686
T ++ +++ IL+ G G + PN+GA+V ++L G+LQ + +F D+ F +
Sbjct: 277 TDDRKVIKKILKEGEGYERPNEGAIVKLKLIGKLQDGTTVFVKKGHEEDEEPFEFKI--- 333
Query: 687 TEHNICEGIERALEKFLKDEKSRLITSLNMPLSPKEFR---IGCPPNSVVEYVV 839
E + EG+E+A+ K E + + S E + PPNS V Y V
Sbjct: 334 DEEQVIEGLEKAVMGMKKGEVALITISPEYAFGSSESKQELAVIPPNSTVYYEV 387
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 185 DRGVLKRITREGEGTETPNQG 247
DR V+K+I +EGEG E PN+G
Sbjct: 279 DRKVIKKILKEGEGYERPNEG 299
>At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase /
FK506-binding protein (ROF1) identical to rotamase FKBP
(ROF1) GB:U49453 [Arabidopsis thaliana] (Mol. Gen.
Genet. 252 (5), 510-517 (1996))
Length = 551
Score = 123 bits (296), Expect = 2e-28
Identities = 54/84 (64%), Positives = 64/84 (76%)
Frame = +1
Query: 259 VHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYG 438
VHY GTLLDGTKFDSSRDR PF+F LG+ VI+ W IG+ TMKKGE + T E AYG
Sbjct: 62 VHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAYG 121
Query: 439 ASGSPPKIPPNATLQFEIEMIDWN 510
SGSPP IP NATLQF++E++ W+
Sbjct: 122 ESGSPPTIPANATLQFDVELLKWD 145
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Frame = +1
Query: 259 VHYVGTLLDGTKF--DSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYA 432
V +G L DGT F + EPFEF ++ V++ V MKKGEV ++T PEYA
Sbjct: 295 VKLIGKLQDGTVFLKKGHGENEEPFEFKTDEEQVVDGLDRAVMKMKKGEVALVTIDPEYA 354
Query: 433 YGASGSPPK---IPPNATLQFEIEMIDWN 510
+G++ S + +PPN+T+ +E++++ ++
Sbjct: 355 FGSNESQQELAVVPPNSTVTYEVDLLTFD 383
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +1
Query: 259 VHYVGTLLDGTKFDSSRDRNEPFEFCLGKDG-VIEAWKIGVPTMKKGEVCILTCAPEYAY 435
V + L DGT S + EF + KDG A V TMKKGE +LT P+Y +
Sbjct: 178 VKFEAKLEDGTVVGKS----DGVEFTV-KDGHFCPALTKAVKTMKKGEKVLLTVKPQYGF 232
Query: 436 GASGSPPK-----IPPNATLQFEIEMIDW 507
G G P +PPNATL+ +E++ W
Sbjct: 233 GEKGKPASAGEGAVPPNATLEINLELVSW 261
Score = 45.2 bits (102), Expect = 5e-05
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Frame = +3
Query: 528 TKNKGILRHILEAGTGLDSPNDGALVTVELEGRLQGDSKIF-----DQRTVTFSLGEGTE 692
T + +++ +L+ G G + PN+GA+V V+L G+LQ D +F + F + E
Sbjct: 268 TDDNKVVKKVLKEGDGYERPNEGAVVKVKLIGKLQ-DGTVFLKKGHGENEEPFEF-KTDE 325
Query: 693 HNICEGIERALEKFLKDEKSRLIT-----SLNMPLSPKEFRIGCPPNSVVEYVV 839
+ +G++RA+ K K E + L+T + S +E + PPNS V Y V
Sbjct: 326 EQVVDGLDRAVMKMKKGEVA-LVTIDPEYAFGSNESQQELAV-VPPNSTVTYEV 377
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 185 DRGVLKRITREGEGTETPNQG 247
D V+K++ +EG+G E PN+G
Sbjct: 270 DNKVVKKVLKEGDGYERPNEG 290
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 176 KNGDRGVLKRITREGEGTETPNQG 247
K +G+ K++ +EGEG ETP G
Sbjct: 34 KEIQQGLKKKLLKEGEGYETPENG 57
>At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative POSSIBLE
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE) (EC 5.2.1.8)
(PPIASE) (ROTAMASE) SP:P30416(Mouse);P59 PROTEIN (HSP
BINDING IMMUNOPHILIN), rabbit,
SWISSPROT:P27124:FKB4_RABBIT
Length = 190
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +1
Query: 259 VHYVGTLLDGTK-FDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAY 435
VHY G L + K FD++R+ N F F LG VI +W I + TMK GEV +TC PEYAY
Sbjct: 37 VHYEGILAEDEKVFDTTREDNLVFSFELGTGSVIRSWDIALKTMKVGEVAKITCKPEYAY 96
Query: 436 GASGSPPKIPPNATLQFEIEMI 501
G +GSPP IPP+ATL FE+E++
Sbjct: 97 GRAGSPPDIPPDATLIFEVELV 118
>At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38936| FK506-binding protein
2-2 precursor (EC 5.2.1.8);
Length = 163
Score = 77.8 bits (183), Expect = 8e-15
Identities = 42/86 (48%), Positives = 49/86 (56%)
Frame = +1
Query: 259 VHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYG 438
VHY G L DGT FDSS +R +PFEF LG VI+ W G+ GE L + YG
Sbjct: 57 VHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKLGYG 116
Query: 439 ASGSPPKIPPNATLQFEIEMIDWNWK 516
GSPP IP ATL F+ E+I N K
Sbjct: 117 EQGSPPTIPGGATLIFDTELIAVNEK 142
>At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38935 FK506-binding protein
2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans
isomerase) (PPiase) (Rotamase) (15 kDa FKBP) (FKBP-15-1)
{Arabidopsis thaliana}, immunophilin (FKBP15-1)
GB:U52046 [Arabidopsis thaliana] (Proc. Natl. Acad. Sci.
U.S.A. 93 (14), 6964-6969 (1996))
Length = 153
Score = 74.9 bits (176), Expect = 6e-14
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +1
Query: 259 VHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYG 438
VHY G L DGT FDSS +R +P EF LG VI W G+ GE L + YG
Sbjct: 57 VHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGACVGEKRKLKIPSKLGYG 116
Query: 439 ASGSPPKIPPNATLQFEIEMIDWN 510
+GSPPKIP ATL F+ E++ N
Sbjct: 117 DNGSPPKIPGGATLIFDTELVAVN 140
>At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) /
immunophilin identical to immunophilin (GI:2104957)
[Arabidopsis thaliana]
Length = 112
Score = 70.1 bits (164), Expect = 2e-12
Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Frame = +1
Query: 241 PRMPWSVHYVGTLLDGT---KFDSSRDRNE-PFEFCLGKDGVIEAWKIGVPTMKKGEVCI 408
P +VH G DG KF S++D + PF F +GK VI+ W GV M+ GEV
Sbjct: 18 PGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVIKGWDEGVIGMQIGEVAR 77
Query: 409 LTCAPEYAYGASGSPP-KIPPNATLQFEIEMI 501
L C+ +YAYGA G P I PN+ L FEIE++
Sbjct: 78 LRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVL 109
>At4g25340.1 68417.m03647 immunophilin-related / FKBP-type
peptidyl-prolyl cis-trans isomerase-related immunophilin
FKBP46 - Spodoptera frugiperda (fall
armyworm),PIR2:A55320
Length = 477
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/97 (36%), Positives = 51/97 (52%)
Frame = +1
Query: 214 GRRGYRNS*PRMPWSVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKK 393
G+ + + P SV Y+G L K S PF+F LG VI+ W +GV M+
Sbjct: 379 GKPNGKRADPGKTVSVRYIGKLQKNGKIFDSNIGKSPFKFRLGIGSVIKGWDVGVNGMRV 438
Query: 394 GEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMID 504
G+ LT P YG G+ +IPPN+ L F++E+I+
Sbjct: 439 GDKRKLTIPPSMGYGVKGAGGQIPPNSWLTFDVELIN 475
>At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 545
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +1
Query: 256 SVHYVGTLLDGTK---FDSSRDRNE-PFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAP 423
SVHY G LL+ K +DS D N+ P EF G+ V E +++ M GE+ ++TC P
Sbjct: 205 SVHYKGMLLNEEKTVFYDSKIDNNDQPLEFSSGEGLVPEGFEMCTRLMLPGEIALVTCPP 264
Query: 424 EYAYGASGSPPKIPPNATLQFEIEMI 501
+YAY PP + A +Q+EIE++
Sbjct: 265 DYAYDKFPRPPGVSEGAHVQWEIELL 290
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 373 GVPTMKKGEVCILTCAPEYAYG----ASGSPPKIPPNATLQFEIEMIDWN 510
G+PTM KGE+ + PE Y +P P + L FEIE++D++
Sbjct: 8 GIPTMHKGEIAMFKMKPEMHYAEIDCPVSAPENFPKDDELHFEIELLDFS 57
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 119 KRSDLKNKIMTVDQGVDITKNGDRGVLKRITREGEGTETPNQ 244
K +L +I +D + D GV+K+I EGEG E+P +
Sbjct: 43 KDDELHFEIELLDFSKAKIASDDLGVIKKILNEGEGWESPRE 84
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 241 PRMPWSVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCA 420
PR P+ V + G EP+ F GK V + +IG+ TM + E ++
Sbjct: 82 PREPYEVKARISAKSGDGHVIFSHTEEPYFFTFGKSEVPKGLEIGIGTMARKEKAVIYVR 141
Query: 421 PEY 429
+Y
Sbjct: 142 KQY 144
>At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 635
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +1
Query: 256 SVHYVGTLLDGTK---FDSSRDRNE-PFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAP 423
SVHY G LL+ K +DS D N+ P EF G+ V E +++ M GE+ ++TC P
Sbjct: 295 SVHYKGMLLNEEKTVFYDSKIDNNDQPLEFSSGEGLVPEGFEMCTRLMLPGEIALVTCPP 354
Query: 424 EYAYGASGSPPKIPPNATLQFEIEMI 501
+YAY PP + A +Q+EIE++
Sbjct: 355 DYAYDKFPRPPGVSEGAHVQWEIELL 380
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 271 GTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYG---- 438
G +++ T+ +S R P LG +I G+PTM KGE+ + PE Y
Sbjct: 65 GVVVESTRSESG-GRGVPIRDVLGNSKMILGLLEGIPTMHKGEIAMFKMKPEMHYAEIDC 123
Query: 439 ASGSPPKIPPNATLQFEIEMIDWN 510
+P P + L FEIE++D++
Sbjct: 124 PVSAPENFPKDDELHFEIELLDFS 147
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 119 KRSDLKNKIMTVDQGVDITKNGDRGVLKRITREGEGTETPNQ 244
K +L +I +D + D GV+K+I EGEG E+P +
Sbjct: 133 KDDELHFEIELLDFSKAKIASDDLGVIKKILNEGEGWESPRE 174
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 241 PRMPWSVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCA 420
PR P+ V + G EP+ F GK V + +IG+ TM + E ++
Sbjct: 172 PREPYEVKARISAKSGDGHVIFSHTEEPYFFTFGKSEVPKGLEIGIGTMARKEKAVIYVR 231
Query: 421 PEY 429
+Y
Sbjct: 232 KQY 234
>At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identical
to Probable FKBP-type peptidyl-prolyl cis-trans
isomerase 3, chloroplast precursor (Ppiase) (Rotamase)
(SP:Q9SCY2) / FK506 binding protein 1 (GI:21535744)
[Arabidopsis thaliana]; contains Pfam PF00254:
peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 208
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/91 (40%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Frame = +1
Query: 262 HYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAW------KIGVPTMKKGEVCILTCAP 423
HYVG L +G FDSS +R +P F +G VI+ W G+P M G L P
Sbjct: 115 HYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPP 174
Query: 424 EYAYGASGSPPK-----IPPNATLQFEIEMI 501
E AYG G+ K IPP + L F+IE I
Sbjct: 175 ELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 205
>At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
Pfam profile: PF00254, FKBP-type peptidyl-prolyl
cis-trans isomerases
Length = 694
Score = 52.0 bits (119), Expect = 5e-07
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 SVHYVGTLLD-GTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYA 432
S+ Y G L D G FDS+ +P F LG + VIE IGV M+ G+ L P
Sbjct: 610 SILYTGKLKDTGNLFDSNLGE-DPLRFRLGGENVIEGLSIGVEGMRVGDKRRLIIPPALG 668
Query: 433 YGASGSPPKIPPNATLQFEIEMI 501
Y G K+P +A L +E+E +
Sbjct: 669 YSKRGLKEKVPKSAWLVYEVEAV 691
>At3g21640.1 68416.m02729 FKBP-type peptidyl-prolyl cis-trans
isomerase family protein similar to rof1 [Arabidopsis
thaliana] GI:1354207; contains Pfam profile: PF00254
FKBP-type peptidyl-prolyl cis-trans isomerases
Length = 365
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +1
Query: 292 KFDSSRDRNEPFEFCLGKDGV-IEAWKIGVPTMKKGEVCILTCAPEYAYGASG--SPPKI 462
KF+ + +P E LGK+ + IGV +MK GE ++ E AYG G S P +
Sbjct: 84 KFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNV 143
Query: 463 PPNATLQFEIEMIDWN 510
PP A L +E+E+I ++
Sbjct: 144 PPMADLLYEVEVIGFD 159
>At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
similarity to peptidyl-prolyl cis-trans isomerase
Length = 143
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 SVHYVGTLL-DGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYA 432
SVHY G L +G FDS+ ++ ++F L VI+ +G+ M G LT PE
Sbjct: 60 SVHYTGKLQGNGKIFDSTVGKSR-YKFRLDAGKVIKGLDVGLNGMLVGGKRKLTIPPEMG 118
Query: 433 YGASGSPPKIPPNATLQFEIEMID 504
YGA G+ IPP++ L F++E+++
Sbjct: 119 YGAEGA-GSIPPDSWLVFDVELLN 141
>At4g39710.1 68417.m05620 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative similar to
FK506 binding protein 1 (GP:21535744) [Arabidopsis
thaliana]
Length = 217
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Frame = +1
Query: 256 SVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWK------IGVPTMKKGEVCILTC 417
++HY DGT FDSS R P +G VI GVP M+ G L
Sbjct: 116 NIHYTARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVGGKRKLQI 175
Query: 418 APEYAYGAS-----GSPPKIPPNATLQFEIEMID 504
P+ AYG IP NATL ++I ++
Sbjct: 176 PPKLAYGPEPAGCFSGDCNIPGNATLLYDINFVE 209
>At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative
Pfam:PF-254: FKBP-type peptidyl-prolyl cis-trans
isomerases
Length = 230
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 SVHYVGTLLDGTKFDSSRDR-----NEPFEFCLGKD---GVIEAWKIGVPTMKKGEVCIL 411
+VHYV G F +SR P+ F +G+ V++ +GV M+ G ++
Sbjct: 127 AVHYVAKW-KGITFMTSRQGLGVGGGTPYGFDVGQSERGNVLKGLDLGVEGMRVGGQRLV 185
Query: 412 TCAPEYAYGASGSPPKIPPNATLQFEIEMI 501
PE AYG G +IPPNAT++ +IE++
Sbjct: 186 IVPPELAYGKKGVQ-EIPPNATIELDIELL 214
>At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein identical to Probable
FKBP-type peptidyl-prolyl cis-trans isomerase 2,
chloroplast precursor (Ppiase) (Rotamase)
(SP:O22870)[Arabidopsis thaliana]; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 223
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 SVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAY 435
+ +YV + G FDSS ++ P+ F +G VI+ G+ +MK G L A+
Sbjct: 128 AANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLDEGILSMKAGGKRRLYIPGPLAF 187
Query: 436 --GASGSP--PKIPPNATLQFEIEM 498
G +P P++ PN+ + F++ +
Sbjct: 188 PKGLVSAPGRPRVAPNSPVIFDVSL 212
>At5g56490.1 68418.m07050 FAD-binding domain-containing protein
strong similarity to At1g32300, At2g46740, At2g46750,
At2g46760; contains PF01565: FAD binding domain
Length = 577
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 540 GILRHILEAGTGLDSPNDGALVTVELEGRLQGDSKIFDQRTVTFSL 677
G+ H++ +G+ LDS DG + + R++G + F Q T + SL
Sbjct: 350 GMQNHMMSSGSCLDSRQDGLITACPWDPRIKG--QFFHQTTFSVSL 393
>At2g33760.1 68415.m04140 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 583
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 537 KGILRHILEAGTGLDSPNDGALVTVELE-GRLQGDSKIFDQ 656
KG+ H + +G GLD+ ALVT + G ++G ++FD+
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDR 167
>At1g67530.1 68414.m07694 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 782
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 639 SKIFDQRTV--TFSLGEGTEHNICEGIERALEKF--LKDEKSRLITSLNMPLSPKEFRIG 806
S+I D+ ++ +H G R L +F L D+ I S MP+ P+E R
Sbjct: 220 SEILDENDSPGSYPCSPNEDHGSVHGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELR-- 277
Query: 807 CP 812
CP
Sbjct: 278 CP 279
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,603,256
Number of Sequences: 28952
Number of extensions: 456071
Number of successful extensions: 1175
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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