Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1345
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    24   1.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.0  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 377 KFWRGMKNTLFVFRIGELICFINFILHGFLAKKIQICI 264
           +F   + N    F +G L C + F L G +  K  IC+
Sbjct: 67  RFVYAVYNIFGAFVMG-LFCILKFALDGLMLDKTGICV 103


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 211 SLSSFIIPTPVIC*TYHKIQICIFLAKNPCNIKLMKQIN 327
           SLS FIIP  +I   Y  I I I+       IK  K +N
Sbjct: 190 SLSLFIIPASIIATCYAIIIITIWSKNAKGFIKNTKAVN 228


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 760 IVVKVYFRMCTFFVFMKCLKALC 692
           I+  V+F +CT++ +   +  LC
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLC 112



 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -3

Query: 270 LYFMICLTYDWCRY 229
           L+F++C+ Y +C +
Sbjct: 140 LFFLLCIYYFYCAF 153


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 463 SLYSCALEWIQLAFDINTLQIVRRN 389
           SL SC   WI LAF+    +++ R+
Sbjct: 309 SLNSCVNPWIYLAFNRELPRLLLRH 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,904
Number of Sequences: 336
Number of extensions: 4073
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)