Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1344X
(315 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W4K8 Cluster: CG3626-PA; n=7; Endopterygota|Rep: CG36... 42 0.002
UniRef50_Q28TX6 Cluster: FAD dependent oxidoreductase; n=26; Bac... 33 0.93
UniRef50_Q98BZ1 Cluster: Sarcosine dehydrogenase; n=4; Alphaprot... 33 1.6
UniRef50_A1SJW0 Cluster: FAD dependent oxidoreductase; n=39; Bac... 33 1.6
UniRef50_Q4FLB1 Cluster: Sarcosine dehydrogenase; n=3; Bacteria|... 32 2.2
UniRef50_A4F0D4 Cluster: Putative oxidoreductase protein; n=3; R... 32 2.2
UniRef50_A1RQ65 Cluster: Glycerophosphoryl diester phosphodieste... 32 2.2
UniRef50_UPI00015B450A Cluster: PREDICTED: similar to nad dehydr... 32 2.9
UniRef50_Q9UI17 Cluster: Dimethylglycine dehydrogenase, mitochon... 32 2.9
UniRef50_A1ZE66 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_UPI0000ECC352 Cluster: Dimethylglycine dehydrogenase, m... 31 5.0
UniRef50_Q5LKS0 Cluster: FAD dependent oxidoreductase/aminomethy... 31 5.0
UniRef50_A7RQ00 Cluster: Predicted protein; n=1; Nematostella ve... 31 5.0
UniRef50_Q5LW00 Cluster: Aminomethyl transferase family protein;... 31 6.6
UniRef50_Q98ID7 Cluster: Dimethylglycine dehydrogenase; n=1; Mes... 30 8.7
UniRef50_Q5LQQ2 Cluster: FAD dependent oxidoreductase/aminomethy... 30 8.7
>UniRef50_Q9W4K8 Cluster: CG3626-PA; n=7; Endopterygota|Rep:
CG3626-PA - Drosophila melanogaster (Fruit fly)
Length = 939
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 125 RVGAGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELEARGRPKG 259
RVG W + GL G F+P+ +++LA+ SI L+K L G P G
Sbjct: 103 RVGGELPWTACGLAGRFEPSYTELKLAEYSIDLIKRLAENGLPTG 147
>UniRef50_Q28TX6 Cluster: FAD dependent oxidoreductase; n=26;
Bacteria|Rep: FAD dependent oxidoreductase - Jannaschia
sp. (strain CCS1)
Length = 837
Score = 33.5 bits (73), Expect = 0.93
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 134 AGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELEARGRPKGGNNVV 274
+GS WH++GL F + A + S++ KELEA G VV
Sbjct: 41 SGSTWHAAGLLPLFNMSFATTHIHDYSVKFYKELEAETGLNAGFAVV 87
>UniRef50_Q98BZ1 Cluster: Sarcosine dehydrogenase; n=4;
Alphaproteobacteria|Rep: Sarcosine dehydrogenase -
Rhizobium loti (Mesorhizobium loti)
Length = 869
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 125 RVGAGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELEA 241
++ +GS WH++GL G + + + R+ + S+ L K LEA
Sbjct: 92 KLTSGSTWHAAGLVGQLRSSASITRVLKYSVDLYKGLEA 130
>UniRef50_A1SJW0 Cluster: FAD dependent oxidoreductase; n=39;
Bacteria|Rep: FAD dependent oxidoreductase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 826
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 128 VGAGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELEAR-GRPKGGNNV 271
+ G+ WH++GL G + + + RL Q S L LEA G G NV
Sbjct: 64 LSCGTTWHAAGLVGPLRASESGTRLVQYSAELYAALEAETGLATGYRNV 112
>UniRef50_Q4FLB1 Cluster: Sarcosine dehydrogenase; n=3;
Bacteria|Rep: Sarcosine dehydrogenase - Pelagibacter
ubique
Length = 814
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 134 AGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELEAR 244
+G+ WH++GL G + RL + S+ L KELE +
Sbjct: 45 SGTTWHAAGLVGQLGASATITRLRKYSLNLYKELEKK 81
>UniRef50_A4F0D4 Cluster: Putative oxidoreductase protein; n=3;
Rhodobacteraceae|Rep: Putative oxidoreductase protein -
Roseobacter sp. SK209-2-6
Length = 809
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 134 AGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELEARGRPKGGNNVVHYYW 286
+G+ WH++G+ G + T +LA +++ ELE G YW
Sbjct: 45 SGTTWHAAGIVGPLRSTFNMTKLAAKALQTFPELERETGLATGYMQTSGYW 95
>UniRef50_A1RQ65 Cluster: Glycerophosphoryl diester
phosphodiesterase; n=7; Shewanella|Rep:
Glycerophosphoryl diester phosphodiesterase - Shewanella
sp. (strain W3-18-1)
Length = 607
Score = 32.3 bits (70), Expect = 2.2
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 143 RWHSSGLGGAFKPTLAQ-VRLAQSSIRLLKELE-ARGRPKGGNNVVHYYWQEQDT 301
RWHS G F PTLAQ + A++ I L EL+ + P VV QEQ T
Sbjct: 433 RWHSVAFAGEFVPTLAQMLNEARNKIGLNIELKYNQADPSLAQAVVSLLQQEQMT 487
>UniRef50_UPI00015B450A Cluster: PREDICTED: similar to nad
dehydrogenase; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to nad dehydrogenase - Nasonia vitripennis
Length = 909
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 125 RVGAGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELEARG 247
++GAGS SG G FKP +A L SI+L ++L+ G
Sbjct: 92 KIGAGSSHFGSGTLGLFKP-IAHRNLISYSIKLYRQLQEMG 131
>UniRef50_Q9UI17 Cluster: Dimethylglycine dehydrogenase,
mitochondrial precursor; n=28; Eumetazoa|Rep:
Dimethylglycine dehydrogenase, mitochondrial precursor -
Homo sapiens (Human)
Length = 866
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 134 AGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELE 238
AGS WH++GL F P + ++ SI+L ++LE
Sbjct: 86 AGSTWHAAGLTTYFHPGINLKKIHYDSIKLYEKLE 120
>UniRef50_A1ZE66 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 231
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 57 KFQSEIVDYFKVF*FSLIFLYCEEWVQGVAGIHQALVEHSSQHLLR*GLP 206
K++ E+ D K + I + W Q +HQAL +H +Q L G+P
Sbjct: 125 KYKGELYDVIKTVQYGQITRFICVWDQYEKSLHQALKKHVNQQLPTSGVP 174
>UniRef50_UPI0000ECC352 Cluster: Dimethylglycine dehydrogenase,
mitochondrial precursor (EC 1.5.99.2) (ME2GLYDH).; n=2;
Deuterostomia|Rep: Dimethylglycine dehydrogenase,
mitochondrial precursor (EC 1.5.99.2) (ME2GLYDH). -
Gallus gallus
Length = 862
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 134 AGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELE 238
AGS WH++GL F P + ++ SI+L ++LE
Sbjct: 85 AGSTWHAAGLTTYFHPGINLKKIHAYSIKLYEKLE 119
>UniRef50_Q5LKS0 Cluster: FAD dependent oxidoreductase/aminomethyl
transferase; n=1; Silicibacter pomeroyi|Rep: FAD
dependent oxidoreductase/aminomethyl transferase -
Silicibacter pomeroyi
Length = 799
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 125 RVGAGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELE 238
++ +G+ WH++GL +P+ RL SI L ELE
Sbjct: 40 KLTSGTTWHAAGLVRRLRPSATLTRLINYSIDLYGELE 77
>UniRef50_A7RQ00 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 808
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 256 GWKQCGSLLLARTRYRMTV 312
G+K+CG LLLARTR R T+
Sbjct: 86 GFKKCGGLLLARTRDRFTL 104
>UniRef50_Q5LW00 Cluster: Aminomethyl transferase family protein;
n=1; Silicibacter pomeroyi|Rep: Aminomethyl transferase
family protein - Silicibacter pomeroyi
Length = 811
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 134 AGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELEAR-GRPKG 259
AGS WH++GL + P + + S++L L+A G+P G
Sbjct: 40 AGSTWHAAGLLPLYYPNQTMSLINKHSMQLYARLQAETGQPSG 82
>UniRef50_Q98ID7 Cluster: Dimethylglycine dehydrogenase; n=1;
Mesorhizobium loti|Rep: Dimethylglycine dehydrogenase -
Rhizobium loti (Mesorhizobium loti)
Length = 812
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 134 AGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELEAR-GRPKG 259
AGS WH++GL ++ + R+ +I + + LEA G+P G
Sbjct: 41 AGSTWHAAGLVPSYARNINIGRMINKTIEIYEGLEAETGQPVG 83
>UniRef50_Q5LQQ2 Cluster: FAD dependent oxidoreductase/aminomethyl
transferase; n=1; Silicibacter pomeroyi|Rep: FAD
dependent oxidoreductase/aminomethyl transferase -
Silicibacter pomeroyi
Length = 812
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 134 AGSRWHSSGLGGAFKPTLAQVRLAQSSIRLLKELE 238
+G+ WH++GL G + + A A + LL+E+E
Sbjct: 45 SGTTWHAAGLVGQLQGSHATTAFASYGVELLQEIE 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,747,473
Number of Sequences: 1657284
Number of extensions: 4616589
Number of successful extensions: 10373
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10373
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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