Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1344X
         (315 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   4.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   5.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    19   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 92   YFKIIYYFT 66
            YFKI+ YFT
Sbjct: 1397 YFKIVCYFT 1405


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 218 RLLKELEARGRPKGGNNVVHYYW 286
           RLLK LE+  + K      +YY+
Sbjct: 96  RLLKNLESCAKIKKTKRYCYYYY 118


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 72  IVDYFKVF*FSLIFLY 119
           + ++ K+F +SLIFL+
Sbjct: 167 VANFNKIFGWSLIFLF 182


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 308 VMRYLVLANNSEPHC 264
           V  Y++L NN   +C
Sbjct: 234 VTLYIILTNNQAKYC 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,250
Number of Sequences: 336
Number of extensions: 1075
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)