Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1344X
         (315 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    27   0.17 
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    27   0.17 
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          22   4.7  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          22   4.7  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          22   4.7  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          22   4.7  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    22   6.2  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 13/46 (28%), Positives = 18/46 (39%)
 Frame = -2

Query: 272 PHCFHPWAXHEPQAP*EA*LRTGQASPEQVLA*MLHQGLMNASDSL 135
           PH +H    H+PQ P            E +   +LH G+   S  L
Sbjct: 77  PHQYHQQVQHQPQPPSTPFANVSTGQNESLANLLLHPGVHQLSSGL 122


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 13/46 (28%), Positives = 18/46 (39%)
 Frame = -2

Query: 272 PHCFHPWAXHEPQAP*EA*LRTGQASPEQVLA*MLHQGLMNASDSL 135
           PH +H    H+PQ P            E +   +LH G+   S  L
Sbjct: 78  PHQYHQQVQHQPQPPSTPFANVSTGQNESLANLLLHPGVHQLSSGL 123


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 131 GAGSRWHSSGLGGAFK-PTLAQVRLAQ 208
           G G    SSG GG+F+ PTL +  L +
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCK 279


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 131 GAGSRWHSSGLGGAFK-PTLAQVRLAQ 208
           G G    SSG GG+F+ PTL +  L +
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCK 279


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 131 GAGSRWHSSGLGGAFK-PTLAQVRLAQ 208
           G G    SSG GG+F+ PTL +  L +
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCK 279


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 131 GAGSRWHSSGLGGAFK-PTLAQVRLAQ 208
           G G    SSG GG+F+ PTL +  L +
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCK 279


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 189 ASVGLNAPPRPDECQRLPAPTLH 121
           AS+  N PP   + ++ PAP  +
Sbjct: 27  ASLAANTPPSASQPKQKPAPAFN 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,195
Number of Sequences: 2352
Number of extensions: 5015
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20748816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)