SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1343
         (764 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B490E Cluster: PREDICTED: hypothetical protein;...    83   1e-14
UniRef50_A7SX45 Cluster: Predicted protein; n=1; Nematostella ve...    74   3e-12
UniRef50_UPI0000588A88 Cluster: PREDICTED: similar to LMBR1 doma...    72   2e-11
UniRef50_A7S873 Cluster: Predicted protein; n=1; Nematostella ve...    68   2e-10
UniRef50_A7SPH6 Cluster: Predicted protein; n=2; Nematostella ve...    63   6e-09
UniRef50_A7SI43 Cluster: Predicted protein; n=1; Nematostella ve...    63   8e-09
UniRef50_UPI0000E46D33 Cluster: PREDICTED: hypothetical protein;...    54   5e-06
UniRef50_A7RQS6 Cluster: Predicted protein; n=1; Nematostella ve...    46   8e-04
UniRef50_A7RRB3 Cluster: Predicted protein; n=2; Nematostella ve...    46   0.001
UniRef50_A7SG30 Cluster: Predicted protein; n=1; Nematostella ve...    45   0.002
UniRef50_A7SH83 Cluster: Predicted protein; n=1; Nematostella ve...    45   0.002
UniRef50_A7RFU5 Cluster: Predicted protein; n=3; Nematostella ve...    42   0.017
UniRef50_UPI0000E4A1F3 Cluster: PREDICTED: similar to Kinesin fa...    37   0.63 
UniRef50_A7REN5 Cluster: Predicted protein; n=2; Nematostella ve...    33   5.9  
UniRef50_A0E6U2 Cluster: Chromosome undetermined scaffold_80, wh...    33   5.9  
UniRef50_A5UXU4 Cluster: Putative uncharacterized protein; n=4; ...    33   7.8  
UniRef50_Q16SL6 Cluster: Chromosome-associated kinesin KIF4A; n=...    33   7.8  

>UniRef50_UPI00015B490E Cluster: PREDICTED: hypothetical protein; n=2;
            Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
            - Nasonia vitripennis
          Length = 976

 Score = 82.6 bits (195), Expect = 1e-14
 Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = -1

Query: 515  QLTSLPPTSVAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLL 336
            +L  LPPT  A+ Q   R + Q+Q WLGN  +PK WGWK     L+PV T     P+ LL
Sbjct: 834  KLEVLPPTEAASAQDALRTHLQIQQWLGNTKEPKKWGWKPTTTGLQPVYTTDDLVPQNLL 893

Query: 335  NTIFCNCKKGCSA-KCGCRKVGL 270
              I C C  GC+   C C+K GL
Sbjct: 894  QYISCRCTTGCNTMNCSCKKYGL 916


>UniRef50_A7SX45 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 605

 Score = 74.1 bits (174), Expect = 3e-12
 Identities = 36/71 (50%), Positives = 41/71 (57%)
 Frame = -1

Query: 515 QLTSLPPTSVAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLL 336
           Q  SLPPTS AA  H  RVY+QVQ W G  L P+DWGWK +D  L+P +T    A   LL
Sbjct: 469 QPESLPPTSAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLQPQRTDQSAAHPSLL 528

Query: 335 NTIFCNCKKGC 303
             I CN    C
Sbjct: 529 ELIRCNSLCSC 539



 Score = 38.3 bits (85), Expect = 0.21
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = -1

Query: 488 VAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLL 360
           V A  H  RVY QVQ W G  L P+D G K +D  L   +TL+
Sbjct: 544 VEAVYHSLRVYQQVQQWRGLALPPEDCGLKEMDGKLPSQRTLV 586


>UniRef50_UPI0000588A88 Cluster: PREDICTED: similar to LMBR1 domain
           containing 2; n=3; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to LMBR1 domain containing 2 -
           Strongylocentrotus purpuratus
          Length = 735

 Score = 71.7 bits (168), Expect = 2e-11
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
 Frame = -1

Query: 485 AAHQHLFRVYYQVQVWLG---NQLDPKDWGWK-LIDNTLEPVQTLLPPAPEKLLNTIFCN 318
           AA  H  RVYYQV+ W G   ++L P DWGW+      +  V+T LPPA E+LL  I CN
Sbjct: 103 AAKHHSLRVYYQVRQWKGIAADELQPDDWGWRERSGGVIVLVRTDLPPALEELLKMIRCN 162

Query: 317 CKKGCSA------KCGCRKVGLFCSLA 255
           C+  CS+      KC C+K  + CS A
Sbjct: 163 CQIDCSSLKCMLLKCTCKKQSIECSAA 189


>UniRef50_A7S873 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1141

 Score = 68.1 bits (159), Expect = 2e-10
 Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
 Frame = -1

Query: 524  KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLGNQL-------DPKDWGWKLIDNTLEPVQT 366
            K   L +LPP+  A  +H  R  YQ     G  L        P+ WGW L D   EP  T
Sbjct: 1034 KGRPLEALPPSKAALLEHTKRAAYQAGHCWGQSLARSPVLPSPEHWGWALSDGKWEPYWT 1093

Query: 365  LLPPAPEKLLNTIFCNCKKGCSAKCGCRKVGLFCS 261
             LP         I C CKKG + +C C+KVGL C+
Sbjct: 1094 ALPDVTRVCQELIRCGCKKGYTGRCSCQKVGLRCT 1128


>UniRef50_A7SPH6 Cluster: Predicted protein; n=2; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1373

 Score = 63.3 bits (147), Expect = 6e-09
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
 Frame = -1

Query: 524  KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLGNQL------DPKDWGWKLIDNTLEPVQTL 363
            K ++   LPPT  A  +   R +YQ  VW  + L       P D+GWKL  +   PV T 
Sbjct: 1237 KQAESERLPPTLAALREATKRAHYQCMVWNSDILANPELPSPSDYGWKLEADEWVPVMTS 1296

Query: 362  LPPAPEKLLNTIFCNC-KKGCSA-KCGCRKVGLFCS 261
            L PAP+ +L+ + C C  + CS  +  CRK GL C+
Sbjct: 1297 LKPAPDAVLHLVKCGCLTERCSTNRWQCRKAGLPCT 1332


>UniRef50_A7SI43 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 616

 Score = 62.9 bits (146), Expect = 8e-09
 Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -1

Query: 449 VQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTIFCNCKKGCSAK-CGCRKVG 273
           VQ W GN + P++WGW +      PVQ   P AP +LL  I CNC   C  + C C K G
Sbjct: 524 VQAWKGNGVSPEEWGWPVTCTGFVPVQMSEPAAPAQLLRNIKCNCGGHCETRLCTCFKNG 583

Query: 272 LFCSLA 255
           L C+ A
Sbjct: 584 LQCTPA 589


>UniRef50_UPI0000E46D33 Cluster: PREDICTED: hypothetical protein; n=3;
            Strongylocentrotus purpuratus|Rep: PREDICTED:
            hypothetical protein - Strongylocentrotus purpuratus
          Length = 1618

 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
 Frame = -1

Query: 506  SLPPTSVAAHQHLFRVYYQVQVWLG--NQL----DPKDWGWKLIDNTLEPVQTLLPPAPE 345
            ++PPT  A  +HL R  YQ  +      Q      P + GWK+ D  +E V   LPPAP 
Sbjct: 1494 NMPPTHDALVKHLMRANYQSAIHTRCLEQYPVIPSPHNHGWKVTDTNIEVVWGDLPPAPS 1553

Query: 344  KLLNTIFCNCKK-GC-------SAKCGCRKVGLFCS 261
             LL   +C+CKK  C         +C CR+  + C+
Sbjct: 1554 TLLELTYCSCKKTSCEEPKAAGKGRCSCRQHNITCT 1589


>UniRef50_A7RQS6 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1216

 Score = 46.4 bits (105), Expect = 8e-04
 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
 Frame = -1

Query: 503  LPPTSVAAHQHLFRVYYQVQVW------LGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEK 342
            LPPTS +  QH+ R  YQ  +W      +     P   G K+ +  LEP+     PAP  
Sbjct: 1095 LPPTSDSLKQHIIRANYQTFIWKYCLQPMVPLPSPDGNGGKITNGRLEPLLMSQDPAPLS 1154

Query: 341  LLNTIFCNCKKGCSAK---CGCRKVGLFCSLATL 249
            LL    C C K    +   C C+   + C+ A L
Sbjct: 1155 LLKLTTCRCVKTACRRDDLCSCKANDIPCTEACL 1188


>UniRef50_A7RRB3 Cluster: Predicted protein; n=2; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1142

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 11/179 (6%)
 Frame = -1

Query: 761  TGCDTTSAFYRRGKNNSFQNV*KKRFTTMC*SF*K**FNSTTCYHQRSSISSCYVRSPQK 582
            +GCDTTS+FY +GK  ++Q     +  T    F      +   +HQ +  S  + R  + 
Sbjct: 961  SGCDTTSSFYGKGKLTAWQTWDIYKDVTPTLQF-----LALNPFHQLTLDSEHFKRIERF 1015

Query: 581  NHLLR*-----VAIHIFREKYA**KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLGNQL-- 423
              +L         I+  R +        +  LPPT     QH+ R  YQ  +W  +++  
Sbjct: 1016 TVILYDKLSPFACINDARMELFCKNNRAMDKLPPTKDTLLQHVKRCIYQAGIWTSSEISQ 1075

Query: 422  ----DPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTIFCNCKKGCSAKCGCRKVGLFCSL 258
                 P  + W     T  P    +P   +       CN  KG   +C C K  L C+L
Sbjct: 1076 PVLPSPDQFAWIKEAGTWVPGWITIPEVSKACSELTKCN-SKGVCTRCKCIKAHLECTL 1133


>UniRef50_A7SG30 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 546

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = -1

Query: 419 PKDWGWKLIDN--TLEPVQTLLPPAPEKLLNTIFCNCKKG-C-SAKCGCRKVGLFCS 261
           P+ +GWK  D     +PV    PPAP+ ++  + C C K  C + +C C+K GL C+
Sbjct: 334 PEKYGWKWNDGDKVWDPVMITSPPAPQAIIQLVKCKCAKDKCVTNRCQCKKSGLKCT 390


>UniRef50_A7SH83 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 604

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
 Frame = -1

Query: 503 LPPTSVAAHQHLFRVYYQVQVW----LGNQL--DPKDWG--WKLIDNTLEPVQTLLPPAP 348
           L PTS A  Q + R +YQ+ VW    + N +   P  +G  W+       PV   LPPAP
Sbjct: 474 LAPTSAALKQAILRSHYQLLVWNNDIVANPVLPSPSVYGRKWQNAKKIWVPVMRDLPPAP 533

Query: 347 EKLLNTIFCNCKKGCSAKCGC 285
           + +++ + C C+ G S   GC
Sbjct: 534 DAIIHLVRCGCEYGKSGG-GC 553


>UniRef50_A7RFU5 Cluster: Predicted protein; n=3; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 604

 Score = 41.9 bits (94), Expect = 0.017
 Identities = 21/43 (48%), Positives = 25/43 (58%)
 Frame = -1

Query: 488 VAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLL 360
           V A  H  RVY QVQ W G  L P+D G K +D  L P +TL+
Sbjct: 543 VGAVYHSLRVYQQVQQWRGLALPPEDCGLKEMDGKLPPQRTLV 585


>UniRef50_UPI0000E4A1F3 Cluster: PREDICTED: similar to Kinesin
           family member 4A; n=2; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to Kinesin family
           member 4A - Strongylocentrotus purpuratus
          Length = 841

 Score = 36.7 bits (81), Expect = 0.63
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 356 PAPEKLLNTIFCNCKKGCSAKCGCRKVGLFCSLATLSRP 240
           P  +K+     CNCK  C   CGC++ G  CS A    P
Sbjct: 660 PVKKKISRAKTCNCKIKCRGTCGCKRNGRSCSKACRCDP 698


>UniRef50_A7REN5 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1107

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = -1

Query: 524 KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLGNQLD------PKDWGWKL 396
           K ++   LPPT  A  +   R +YQ  VW  + L       P D+GWKL
Sbjct: 832 KQAESERLPPTLAALREATKRAHYQRMVWNSDTLANPELPLPSDYGWKL 880


>UniRef50_A0E6U2 Cluster: Chromosome undetermined scaffold_80, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_80,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 218

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -1

Query: 431 NQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTIFCNCKK-GCSAK-CGCRKVGLFCS 261
           N L+   +  K+++   E     +     KL ++  CNC+K GC  K C C ++G+ CS
Sbjct: 121 NLLERNQFIEKMVERNPEAFNQKVKEVDYKLAHSKGCNCRKSGCKKKYCECYQLGIECS 179


>UniRef50_A5UXU4 Cluster: Putative uncharacterized protein; n=4;
           Chloroflexaceae|Rep: Putative uncharacterized protein -
           Roseiflexus sp. RS-1
          Length = 293

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 300 CKMWLQKSWT-VLFPGNTVKADHARMLSHQLLKI 202
           C +W   SW+ VLFP N   AD+ R+ S +L  +
Sbjct: 14  CAVWAHPSWSGVLFPRNARSADYLRLYSRRLTTV 47


>UniRef50_Q16SL6 Cluster: Chromosome-associated kinesin KIF4A; n=1;
            Aedes aegypti|Rep: Chromosome-associated kinesin KIF4A -
            Aedes aegypti (Yellowfever mosquito)
          Length = 1173

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -1

Query: 335  NTIFCNCKKGCSAK-CGCRKVGLFC 264
            N   C+C   CS K CGC+K G FC
Sbjct: 1053 NQAHCSCGSTCSTKRCGCKKQGEFC 1077


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,407,245
Number of Sequences: 1657284
Number of extensions: 11691734
Number of successful extensions: 30542
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 29439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30522
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -