Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1343
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    24   1.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   3.5  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   4.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   6.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.2  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 255 CQGTKQSNFSATTFCTTPFLAVAKYCVEKFLR 350
           C+G+ +S    +    T FL     C E FLR
Sbjct: 59  CEGSCKSQVQPSVITPTGFLKECYCCRESFLR 90


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +3

Query: 216 GDSTFEHDRP*QCCQGTKQSNFSATTFC 299
           G   ++ +R   CCQ + +   S + FC
Sbjct: 77  GSKIWQMERSCMCCQESGEREASVSLFC 104


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = +1

Query: 226 HSSMIGLDSVAREQNSPTFLQPHFALHPFLQLQNIVLR 339
           H ++ G   +   ++ P F QPH  L   + + +++ +
Sbjct: 107 HKALQGAIMITFYRDEPRFSQPHQILTLLMDIDSLITK 144


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = +1

Query: 226 HSSMIGLDSVAREQNSPTFLQPHFALHPFLQLQNIVLR 339
           H ++ G   +   ++ P F QPH  L   + + +++ +
Sbjct: 267 HKALQGAIMITFYRDEPRFSQPHQILTLLMDIDSLITK 304


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = +1

Query: 226 HSSMIGLDSVAREQNSPTFLQPHFALHPFLQLQNIVLR 339
           H ++ G   +   ++ P F QPH  L   + + +++ +
Sbjct: 267 HKALQGAIMITFYRDEPRFSQPHQILTLLMDIDSLITK 304


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 344 KLLNTIFCNCKKGCSAKCGCRKVGLFCS 261
           +L+N   CNCK G   +  C     FC+
Sbjct: 317 QLVNDYHCNCKLGFMGR-HCESKVNFCA 343


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 515 QLTSLPPTSVAAHQHLFRVYYQVQVW 438
           Q+T L P ++ +   + R+Y    +W
Sbjct: 284 QITELEPETIESQDAITRIYAIATMW 309


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 475 NICFGYITK 449
           N CFG+ITK
Sbjct: 528 NFCFGFITK 536


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,286
Number of Sequences: 336
Number of extensions: 3193
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)