Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1343
(764 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23887| Best HMM Match : Pre-SET (HMM E-Value=0.05) 97 2e-20
SB_37903| Best HMM Match : Pre-SET (HMM E-Value=0.11) 89 5e-18
SB_2690| Best HMM Match : Pre-SET (HMM E-Value=0.11) 89 5e-18
SB_40180| Best HMM Match : Pre-SET (HMM E-Value=0.11) 89 5e-18
SB_2462| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 5e-18
SB_11735| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25) 68 7e-12
SB_10195| Best HMM Match : CXC (HMM E-Value=0.003) 68 1e-11
SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037) 63 2e-10
SB_44608| Best HMM Match : Pre-SET (HMM E-Value=2.9) 61 8e-10
SB_35556| Best HMM Match : Pre-SET (HMM E-Value=2.9) 61 8e-10
SB_21917| Best HMM Match : CXC (HMM E-Value=0.22) 61 1e-09
SB_38543| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5) 42 5e-04
SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_45702| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71) 39 0.004
SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 38 0.009
SB_13856| Best HMM Match : CXC (HMM E-Value=0.021) 37 0.015
SB_45398| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_34845| Best HMM Match : CXC (HMM E-Value=0.03) 36 0.027
SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_40999| Best HMM Match : SAM_1 (HMM E-Value=7.9) 31 0.77
SB_37456| Best HMM Match : DJ-1_PfpI (HMM E-Value=3) 31 0.77
SB_8773| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_7996| Best HMM Match : efhand (HMM E-Value=1.4) 29 3.1
SB_36671| Best HMM Match : IBB (HMM E-Value=2.8) 29 4.1
SB_32822| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_29668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05) 29 4.1
SB_8115| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_6198| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-18) 28 7.2
SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39) 28 9.5
SB_29710| Best HMM Match : LHC (HMM E-Value=3.3) 28 9.5
>SB_23887| Best HMM Match : Pre-SET (HMM E-Value=0.05)
Length = 922
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = -1
Query: 515 QLTSLPPTSVAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLL 336
Q SLPPTS AA H RVY+QVQ W G L P+DWGWK +D L+P +T A LL
Sbjct: 814 QPESLPPTSAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLQPQRTDQSAAHPSLL 873
Query: 335 NTIFCNCKKGCSA-KCGCRKVGLFCSLA 255
I CNCK GCS+ KC C++ L C+ A
Sbjct: 874 ELIRCNCKTGCSSRKCSCKRHDLDCTAA 901
>SB_37903| Best HMM Match : Pre-SET (HMM E-Value=0.11)
Length = 220
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = -1
Query: 506 SLPPTSVAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTI 327
SLP S AA H RVY+QVQ W G L P+DWGWK +D L P +T A LL I
Sbjct: 115 SLPQISAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELI 174
Query: 326 FCNCKKGCSA-KCGCRKVGLFCSLA 255
CNCK GCS+ KC C++ L C+ A
Sbjct: 175 RCNCKTGCSSRKCSCKRHDLDCTAA 199
>SB_2690| Best HMM Match : Pre-SET (HMM E-Value=0.11)
Length = 715
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = -1
Query: 506 SLPPTSVAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTI 327
SLP S AA H RVY+QVQ W G L P+DWGWK +D L P +T A LL I
Sbjct: 610 SLPQISAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELI 669
Query: 326 FCNCKKGCSA-KCGCRKVGLFCSLA 255
CNCK GCS+ KC C++ L C+ A
Sbjct: 670 RCNCKTGCSSRKCSCKRHDLDCTAA 694
>SB_40180| Best HMM Match : Pre-SET (HMM E-Value=0.11)
Length = 291
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = -1
Query: 506 SLPPTSVAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTI 327
SLP S AA H RVY+QVQ W G L P+DWGWK +D L P +T A LL I
Sbjct: 186 SLPQISAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELI 245
Query: 326 FCNCKKGCSA-KCGCRKVGLFCSLA 255
CNCK GCS+ KC C++ L C+ A
Sbjct: 246 RCNCKTGCSSRKCSCKRHDLDCTAA 270
>SB_2462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = -1
Query: 506 SLPPTSVAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTI 327
SLP S AA H RVY+QVQ W G L P+DWGWK +D L P +T A LL I
Sbjct: 466 SLPQISAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELI 525
Query: 326 FCNCKKGCSA-KCGCRKVGLFCSLA 255
CNCK GCS+ KC C++ L C+ A
Sbjct: 526 RCNCKTGCSSRKCSCKRHDLDCTAA 550
>SB_11735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = -1
Query: 503 LPPTSVAAHQHLFRVYYQVQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTIF 324
LPPTS AA H RV+ QVQ W GN P++WGW + PVQ P AP +LL I
Sbjct: 223 LPPTSDAARFHSHRVFLQVQAWKGNDASPEEWGWAVTCTGFVPVQMSEPAAPAQLLRNIT 282
Query: 323 CNCKKGCSAK-CGCRKVGLFCSLA 255
CNC C + C C K GL C+ A
Sbjct: 283 CNCGGHCETRLCTCFKNGLQCTPA 306
>SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25)
Length = 781
Score = 68.1 bits (159), Expect = 7e-12
Identities = 39/96 (40%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Frame = -1
Query: 524 KTSQLTSLPPTSVAAHQHLFRVYYQVQVW---LGNQLD---PKDWGWKLIDNTLEPVQTL 363
K + LPPTS + HL R YQ VW L D P+D GW+ L+PV
Sbjct: 653 KKQKSERLPPTSNSLQHHLERANYQALVWRRSLEAMQDLPRPEDSGWERSGIELKPVLMS 712
Query: 362 LPPAPEKLLNTIFCNCKKGCSAKCGCRKVGLFCSLA 255
PAP LL C CK GC C C GL CS A
Sbjct: 713 KDPAPSSLLELSTCGCKSGCQRNCSCSNNGLSCSKA 748
>SB_10195| Best HMM Match : CXC (HMM E-Value=0.003)
Length = 1365
Score = 67.7 bits (158), Expect = 1e-11
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = -1
Query: 524 KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLGNQL------DPKDWGWKLIDNTLEPVQTL 363
K ++ LPPT A + R +YQ VW + L P D+GWKL + PV T
Sbjct: 1229 KQAESERLPPTLAALREATKRAHYQCMVWNSDILANPELPSPSDYGWKLEADEWVPVMTS 1288
Query: 362 LPPAPEKLLNTIFCNC-KKGCSA-KCGCRKVGLFCS 261
L PAP+ +L+ + C C + CS +C CRK GL C+
Sbjct: 1289 LKPAPDAVLHLVKCGCLTQRCSTNRCQCRKAGLPCT 1324
>SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037)
Length = 926
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Frame = -1
Query: 524 KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLGNQL------DPKDWGWKLIDNTLEPVQTL 363
K ++ LPPT A + R +YQ VW + L P D+GWKL + PV T
Sbjct: 613 KQAESERLPPTLAALREATKRAHYQCMVWNSDILANPELPSPSDYGWKLEADEWVPVMTS 672
Query: 362 LPPAPEKLLNTIFCNC-KKGCSA-KCGCRKVGLFCS 261
L PAP+ +L+ + C C + CS + CRK GL C+
Sbjct: 673 LKPAPDAVLHLVKCGCLTERCSTNRWQCRKAGLPCT 708
>SB_44608| Best HMM Match : Pre-SET (HMM E-Value=2.9)
Length = 91
Score = 61.3 bits (142), Expect = 8e-10
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -1
Query: 425 LDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTIFCNCKKGCSA-KCGCRKVGLFCSLA 255
L P+DWGWK +D L P +T A LL I CNCK GCS+ KC C++ L C+ A
Sbjct: 13 LPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELIRCNCKTGCSSRKCSCKRHDLDCTAA 70
>SB_35556| Best HMM Match : Pre-SET (HMM E-Value=2.9)
Length = 91
Score = 61.3 bits (142), Expect = 8e-10
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -1
Query: 425 LDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTIFCNCKKGCSA-KCGCRKVGLFCSLA 255
L P+DWGWK +D L P +T A LL I CNCK GCS+ KC C++ L C+ A
Sbjct: 13 LPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELIRCNCKTGCSSRKCSCKRHDLDCTAA 70
>SB_21917| Best HMM Match : CXC (HMM E-Value=0.22)
Length = 470
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -1
Query: 449 VQVWLGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTIFCNCKKGCSAK-CGCRKVG 273
+ W GN + P++WGW + PVQ P AP +LL I CNC C + C C K G
Sbjct: 372 LHAWKGNNVSPEEWGWAVTCTGFVPVQMSEPAAPAQLLRNITCNCGGHCETRSCTCFKNG 431
Query: 272 LFCSLA 255
L C+ A
Sbjct: 432 LQCTPA 437
>SB_38543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = -1
Query: 407 GWKLIDNTLEPVQTLLPPAPEKLLNTIFCNCKKGC-SAKCGCRKVGLFCSLA 255
GW+L LEP++T LPPAP+ LL + CNC + C S++C RK G+ C+ A
Sbjct: 273 GWRLDKEKLEPIKTDLPPAPQSLLQIVRCNCMQDCSSSRCFWRKNGIECTPA 324
>SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = -1
Query: 419 PKDWGWKLID--NTLEPVQTLLPPAPEKLLNTIFCNCKKG-C-SAKCGCRKVGLFCS 261
P ++GWK D PV T LPPAPE +++ + C C K C + +C CRK GL C+
Sbjct: 363 PSEYGWKWQDAEEIWVPVMTDLPPAPEAIIHLVRCGCAKDRCINQRCKCRKSGLGCT 419
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 48.8 bits (111), Expect = 5e-06
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Frame = -1
Query: 761 TGCDTTSAFYRRGKNNSFQNV*KKRFTTMC*SF*--K**FNSTTCYHQRSSISSCYVRSP 588
TGCD+TS +R GK N+++ K + + T + S Y +
Sbjct: 477 TGCDSTSGLFRIGKKNAWRVFLKSQEWQEAIGDVGCEVPLPQETERRCERFVCSLYTSAK 536
Query: 587 QKNHLLR*VAIHIFREKYA**KTSQLTSLPPTSVAAHQHLFRVYYQVQVW------LGNQ 426
+ V +F +K +TS+ LPPT+ + H+ R YQ +W + N
Sbjct: 537 KAGVTADDVRYWMFCQKK---QTSEC--LPPTNDSLSHHIKRANYQAYIWRSSTTAMQNL 591
Query: 425 LDPKDWGWKLIDNTLEPVQTLLPPAPEKLLNTIFCNCKKG-CSAK--CGCRKVGLFCSLA 255
P++ GW+ LEP+ PAPE LL C+C+K C C C+ + C+ A
Sbjct: 592 PLPENNGWRNNAGQLEPLLMPRDPAPEGLLELTTCSCEKSRCKRDDLCPCKSNQMPCTEA 651
>SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = -1
Query: 419 PKDWGWKLIDN--TLEPVQTLLPPAPEKLLNTIFCNCKKG-C-SAKCGCRKVGLFCS 261
P+ +GWK D +PV T PPAP+ ++ + C C K C + +C C+K GL C+
Sbjct: 278 PEKYGWKWNDGDKVWDPVMTTSPPAPQVIIQLVKCKCAKDRCVTNRCQCKKSGLKCT 334
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Frame = -1
Query: 503 LPPTSVAAHQHLFRVYYQVQVW------LGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEK 342
LPPTS + QH+ R YQ +W + P G K+ + LEP+ PAP
Sbjct: 1240 LPPTSDSLKQHIIRANYQTFIWKYCLQPMVPLPSPDGNGGKITNGRLEPLLMSQDPAPLS 1299
Query: 341 LLNTIFCNCKKGCSAK---CGCRKVGLFCSLATL 249
LL C C K + C C+ + C+ A L
Sbjct: 1300 LLKLTTCRCVKTACRRDDLCSCKANDIPCTEACL 1333
>SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5)
Length = 715
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = -1
Query: 503 LPPTSVAAHQHLFRVYYQVQVW------LGNQLDPKDWGWKLIDNTLEPVQTLLPPAPEK 342
LPP S + + + YQ +W L N P++ GW++ +EP+ PAPE
Sbjct: 33 LPPISDSLSHIIKKANYQACIWGSSTTPLQNLPSPENNGWRINAGQIEPLLMSRDPAPEG 92
Query: 341 LLNTIFCNCK 312
LL I C+C+
Sbjct: 93 LLELIKCSCE 102
>SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 515 QLTSLPPTSVAAHQHLFRVYYQVQVWLGNQLDP--KDWGWKLIDNTLEPVQTLLPPAPEK 342
Q L TS AA H + V+ QV W N+L +DWGW L + + P T L P+
Sbjct: 435 QPQKLSHTSAAAKYHGYSVFLQVNQWQCNELGMSIEDWGWHLTNGQVLPKLTDLQLEPQN 494
Query: 341 LL 336
LL
Sbjct: 495 LL 496
>SB_45702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Frame = -1
Query: 524 KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLGNQL-------DPKDWGWKLIDN-TLEPVQ 369
K SQL+S+ H R YQ L P DWGW+ DN T P+
Sbjct: 225 KISQLSSV--NDARKEMHCKRAAYQAGYCRAQSLVVQPVMPSPADWGWESSDNSTWRPLW 282
Query: 368 TLLPPAPEKLLNTIFCNCK--KGCSAKC 291
+LL P+ + + C C+ KGC +C
Sbjct: 283 SLL-PSMSTCIKLVKCGCQPDKGCKRRC 309
>SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71)
Length = 361
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Frame = -1
Query: 515 QLTSLPPTSVAAHQHLFRVYYQVQVWLG------NQLDPKDWGWK--LIDNTLEP--VQT 366
++ SLPP++ A +++ R Q +W +DP ++G+ + +L P V T
Sbjct: 237 KIQSLPPSTEAFTENVKRAQLQTIIWKAAVSLDPPSIDPVEYGYNRHVPSRSLIPTTVPT 296
Query: 365 LLPPAPEKLLNTIFCNCK--KGC-SAKCGCRKVGLFCSL 258
+P AP+++L I CN + K C + +C C + L C+L
Sbjct: 297 GVPLAPDEILPLIKCNYEGDKRCKTQRCSCSRARLPCTL 335
>SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 38.7 bits (86), Expect = 0.005
Identities = 41/173 (23%), Positives = 67/173 (38%), Gaps = 6/173 (3%)
Frame = -1
Query: 758 GCDTTSAFYRRGKNNSFQNV*KKRFTTMC*SF*K**FNSTTCYHQRSSISSCYVRSPQKN 579
GCDTTS+FY +GK ++Q + T F + +HQ + S + R +
Sbjct: 665 GCDTTSSFYGKGKLTAWQTWDIYKDVTPTLQF-----LALNPFHQLTLDSEHFKRIERFT 719
Query: 578 HLLR*VAIHIFREKYA**KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLGNQL------DP 417
+L + + + S A QH+ R YQ +W +++ P
Sbjct: 720 VILYDKLVRLLASTM-----QEWNSFD----ALLQHVKRCIYQAGIWTSSEISQPVLPSP 770
Query: 416 KDWGWKLIDNTLEPVQTLLPPAPEKLLNTIFCNCKKGCSAKCGCRKVGLFCSL 258
+ W T P +P + C+CK C+ +C C K L C+L
Sbjct: 771 DQFAWVKEAGTWVPRWITIPEVSKACSELTKCSCKGVCT-RCKCIKAHLECTL 822
>SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = -1
Query: 524 KTSQLTSLPPTSVAAHQHLFRVYYQV--QVWLGNQL--DPKDWGWKLID--NTLEPVQTL 363
K + LPPTS A Q + R +YQ+ + N + P ++GWK D V T
Sbjct: 759 KQERSERLPPTSAALKQAILRSHYQLLNNDIVANPVLPSPSEYGWKWQDAEKIWVLVMTD 818
Query: 362 LPPAPEKLLN 333
LPPAPE +++
Sbjct: 819 LPPAPEAIIH 828
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 356 PAPEKLLNTIFCNCKKGCSAKCGCRKVGLFCSLA 255
PAP LL C CK GC C GL CS A
Sbjct: 1344 PAPSSLLELSTCGCKSGCQRNCSFNNNGLSCSEA 1377
>SB_13856| Best HMM Match : CXC (HMM E-Value=0.021)
Length = 464
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = -1
Query: 524 KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLG-NQLDPKDWGWKLIDNTLEPVQTLLPPAP 348
K ++ LPPT HQ + R +YQ+ VW N P + T E +
Sbjct: 206 KQARSQQLPPTDATLHQAVLRGHYQLLVWNNDNSCQPS------LTITREVWMEMERWRQ 259
Query: 347 EKLLNTIFCNCKKG-C-SAKCGCRKVGLFCS 261
++ + C C K C + +C C+K GL C+
Sbjct: 260 GAIIQLVKCKCAKDKCVTNRCQCKKSGLRCT 290
>SB_45398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 494 TSVAAHQHLFRVYYQVQVWLGN-QLDPKDWGWK 399
T A+ H R +YQVQ W GN L P++W WK
Sbjct: 1 THAASAFHSLRTFYQVQQWRGNCDLLPENWRWK 33
>SB_34845| Best HMM Match : CXC (HMM E-Value=0.03)
Length = 1397
Score = 36.3 bits (80), Expect = 0.027
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = -1
Query: 524 KTSQLTSLPPTSVAAHQHLFRVYYQVQVWLG-NQLDPKDWGWKLIDNTLEPVQTLLPPAP 348
K ++ LPPT HQ + R +YQ+ VW N P + T E +
Sbjct: 334 KQARSQQLPPTDATLHQAVLRGHYQLLVWNNDNSCQPS------LTITREVWVEMERWRQ 387
Query: 347 EKLLNTIFCNCKKG-C-SAKCGCRKVGLFCS 261
++ + C C K C + +C C+K GL C+
Sbjct: 388 GAIIQLVKCKCAKDKCVTNRCQCKKSGLKCT 418
>SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 416 KDWGWKLIDNTLEPVQTLLPPAPEKL-LNTIFCNCKKGCSA-KCGCRKVGLFCS 261
KDW + + E + L E+ ++++ C CKK C A C C GL C+
Sbjct: 502 KDWQYSFVSMQEEVCSSKLHLCFERSRMHSLSCQCKKKCVAPNCTCVSNGLVCT 555
>SB_40999| Best HMM Match : SAM_1 (HMM E-Value=7.9)
Length = 233
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1
Query: 506 SLPPTSVAAHQHLFRVYYQVQVW 438
SLP S AA H RVY+QVQ W
Sbjct: 209 SLPQISAAAIYHSLRVYHQVQQW 231
>SB_37456| Best HMM Match : DJ-1_PfpI (HMM E-Value=3)
Length = 232
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 761 TGCDTTSAFYRRGKNNSFQ 705
TGCDT S F R+GK ++FQ
Sbjct: 209 TGCDTVSFFSRKGKKSAFQ 227
>SB_8773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 761 TGCDTTSAFYRRGKNNSFQ 705
TGCDT S F R+GK ++FQ
Sbjct: 401 TGCDTVSFFSRKGKKSAFQ 419
>SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = -1
Query: 500 PPTSVAAHQHLFRVYYQVQVW------LGNQLDPKDWGWKLIDNTLEPV 372
PPTS + H+ R YQ +W + P GWK+ + LEP+
Sbjct: 778 PPTSDSLKLHIIRANYQTFIWKNCLQPMVPLSSPDGNGWKITNRRLEPL 826
>SB_7996| Best HMM Match : efhand (HMM E-Value=1.4)
Length = 570
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -2
Query: 754 AIRHLLFT--GEEKTTVFKMFEKKDLLQCAEVFKNSNSTQQHVITNGVQFLLAMYGA 590
A+ HL T G K V K + L +CA +F S S++ + T G + LL MYG+
Sbjct: 443 ALLHLKTTPYGIGKVGVLKKYAA--LAECAAMFMASESSKVAIETAGERALLIMYGS 497
>SB_36671| Best HMM Match : IBB (HMM E-Value=2.8)
Length = 1080
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 524 KTSQLTSLPPTSVAAHQHLFRVYYQVQVW 438
K + LPPTS + HL R YQ VW
Sbjct: 1048 KKQKSKRLPPTSNSLQHHLERAKYQALVW 1076
>SB_32822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 761 TGCDTTSAFYRRGKNNSFQ 705
TGCDT S FY +GK + +
Sbjct: 1318 TGCDTVSCFYGKGKKKALE 1336
>SB_29668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
Frame = -1
Query: 509 TSLPPTSVAAHQHLFRVYYQVQVWLGNQL------DPKDWGWKLIDNTLEPVQTLLPPAP 348
+ LPP H +R YQ +W + P GWK+ + L PAP
Sbjct: 158 SQLPPCVDTLRMHCYRANYQTAIWRRSLQRCPEVPSPVVQGWKMQEGMLAVNWMAGDPAP 217
Query: 347 EKLLNTIFCN--CK 312
+L + C CK
Sbjct: 218 MAVLELLSCQYLCK 231
>SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05)
Length = 770
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 317 CKKGCSAKCGCRKVGLFCS--LATLSRPIMLEC 225
CK GC A+C C + L CS A L+R + C
Sbjct: 363 CKIGCPARCTCTQASLKCSALAAPLNRVTVKLC 395
>SB_8115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 317 CKKGCSAKCGCRKVGLFCS 261
CK GC A+C C + L CS
Sbjct: 88 CKIGCPARCTCTQASLECS 106
>SB_6198| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-18)
Length = 347
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 279 FSATTFCTTPFLAVAKYCVEKFLRCWW 359
F TFC FL VA ++K+L W
Sbjct: 116 FFGVTFCGVSFLTVAALSIDKYLALHW 142
>SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39)
Length = 1123
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 332 TIFCNCKKGCSAKCGCRKVGLFC 264
++FC C K C A C+ FC
Sbjct: 1013 SVFCGCAKTCKASISCQPKFKFC 1035
>SB_29710| Best HMM Match : LHC (HMM E-Value=3.3)
Length = 343
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -1
Query: 449 VQVWLGNQLDP--KDWGWKLIDNTLEPVQTLLPPAPEKLL 336
V W N+L +DWGW L + + P T L P+ LL
Sbjct: 270 VNQWQCNELGMSIEDWGWHLTNGQVLPKLTDLQLEPQNLL 309
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,008,559
Number of Sequences: 59808
Number of extensions: 377078
Number of successful extensions: 1040
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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