Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1342
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.88 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.88 
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.7  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   4.7  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.6 bits (56), Expect = 0.88
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -3

Query: 611 YVAIAQAVLPLYKNKNKTCNGRRKSI 534
           Y+ + QAVLPL KN N  CN  R+SI
Sbjct: 536 YIVLVQAVLPLDKNLN-DCN--RQSI 558


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 26.6 bits (56), Expect = 0.88
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 622 RGCCTSPLPRQCCH 581
           +G C  P PR+CCH
Sbjct: 190 QGRCFGPKPRECCH 203


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 390 KHTETCEKNPLPTKDVIEQEKS 455
           K+T TCE   LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 202 QTEAQSFHWCRRHGD 158
           QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,610
Number of Sequences: 2352
Number of extensions: 16278
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)