Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1338X
(498 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0387 - 8016399-8016575,8016661-8016788,8017073-8017214,801... 109 1e-24
10_02_0148 - 5859664-5859828,5859916-5860043,5860310-5860451,586... 64 6e-19
02_05_1150 + 34481965-34482076,34482174-34482268,34482380-344824... 49 2e-06
01_07_0052 - 40767252-40767347,40767455-40767562,40767689-407678... 45 4e-05
01_07_0050 - 40751994-40752086,40752193-40752300,40752501-407526... 45 4e-05
10_08_0921 + 21586034-21586229,21586464-21586576,21586768-215868... 44 5e-05
01_07_0051 - 40759529-40759624,40759728-40759835,40759972-407601... 44 9e-05
11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051... 43 1e-04
08_02_0005 + 11190901-11191896 30 0.90
11_06_0272 + 21806681-21806908,21806991-21807233,21807318-218074... 29 2.1
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 28 3.6
12_02_1003 - 25183468-25184010,25184295-25184551,25184795-251849... 28 4.8
11_03_0063 + 9515666-9516656,9517503-9518599 28 4.8
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 28 4.8
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 28 4.8
01_01_0100 - 755894-756662,757086-757598,758718-761050 28 4.8
11_08_0020 - 27711598-27711669,27711854-27711970,27712088-277122... 27 6.3
11_08_0036 + 27850822-27850920,27851773-27851949,27852040-278522... 27 8.4
11_02_0104 + 8329231-8329902 27 8.4
11_02_0097 - 8285425-8286090 27 8.4
11_02_0094 - 8250460-8250819 27 8.4
11_02_0093 - 8238947-8239615 27 8.4
03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689 27 8.4
>03_02_0387 -
8016399-8016575,8016661-8016788,8017073-8017214,
8017301-8017396,8017572-8017712,8017857-8018031,
8018443-8018575,8018661-8018733,8018807-8018900,
8019890-8019981,8020091-8020185,8020267-8020378
Length = 485
Score = 109 bits (262), Expect = 1e-24
Identities = 48/80 (60%), Positives = 62/80 (77%)
Frame = +2
Query: 257 LNFGSTSFLSLDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVEE 436
+NF S ++L L NE IIDS + ++EKYGVGSCGPRGFYGTIDVHL+ E ++AKFL +
Sbjct: 114 INFASANYLGLIGNEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKIAKFLGTPD 173
Query: 437 TCVYSYGFSTIASAIPSYAK 496
+ +YSYG STI S IP++ K
Sbjct: 174 SILYSYGISTIFSVIPAFCK 193
>10_02_0148 -
5859664-5859828,5859916-5860043,5860310-5860451,
5860548-5860643,5860836-5860976,5861799-5861973,
5862416-5862702,5862777-5862870,5863244-5863335,
5863459-5863553,5863648-5863759
Length = 508
Score = 63.7 bits (148), Expect(2) = 6e-19
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +2
Query: 257 LNFGSTSFLSLDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHL 394
+NF S ++L L NE IIDS + ++EKYGVGSCGPR FYGTI +L
Sbjct: 114 VNFASANYLGLIGNEKIIDSCVGSVEKYGVGSCGPRSFYGTIGSYL 159
Score = 47.6 bits (108), Expect(2) = 6e-19
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +2
Query: 383 DVHLELEERLAKFLEVEETCVYSYGFSTIASAIPSYAK 496
DVHL+ E ++A FL +++ +YSYG STI S IP++ K
Sbjct: 183 DVHLDCESKIANFLGTQDSILYSYGISTIFSVIPAFCK 220
>02_05_1150 +
34481965-34482076,34482174-34482268,34482380-34482471,
34482878-34482971,34483191-34483354,34483755-34483929,
34484017-34484157,34484357-34484452,34484549-34484690,
34484953-34485080,34485179-34485343
Length = 467
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +2
Query: 383 DVHLELEERLAKFLEVEETCVYSYGFSTIASAIPSYAK 496
DVHL+ E ++AKFL +++ +YSYG STI S IP++ K
Sbjct: 142 DVHLDCETKIAKFLGTQDSILYSYGISTIFSVIPAFCK 179
>01_07_0052 -
40767252-40767347,40767455-40767562,40767689-40767855,
40767930-40768056,40768138-40768299,40768467-40768630,
40768722-40768815,40768892-40769016,40769110-40769255,
40769361-40769449,40769564-40769608,40770165-40770230,
40770332-40770457
Length = 504
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 251 KFLNFGSTSFLSLDK-NETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLE 427
K LN GS ++L +E +++++KY +C R G +H+ELEE +A+F+
Sbjct: 116 KCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVG 175
Query: 428 VEETCVYSYGFSTIASAIPS 487
++ G+ T ++ IP+
Sbjct: 176 KPAAILFGMGYVTNSAIIPA 195
>01_07_0050 -
40751994-40752086,40752193-40752300,40752501-40752667,
40752756-40752882,40752984-40753145,40753674-40753837,
40753931-40754024,40754160-40754284,40754387-40754532,
40754676-40754764,40755524-40755589,40755990-40756148
Length = 499
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 251 KFLNFGSTSFLSLDK-NETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLE 427
K LN S ++L +E +++++KY +C R G +H+ELEE +A+F+
Sbjct: 112 KCLNLASFNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGNTQLHIELEELVARFVR 171
Query: 428 VEETCVYSYGFSTIASAIPS 487
+ + G++T ++ IP+
Sbjct: 172 KPSAILLAMGYATNSAIIPA 191
>10_08_0921 +
21586034-21586229,21586464-21586576,21586768-21586875,
21586967-21587205,21587301-21587399,21587448-21587535,
21587617-21587750,21588274-21588362,21588718-21588751,
21588830-21588898,21589216-21589339
Length = 430
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +2
Query: 212 GSRGTSNNGNIK*KFLNFGSTSFLSLDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVH 391
G G+ + K + F ++ L + I +A+KA E+YG+G G G H
Sbjct: 66 GGEGSGQEEKVDEKLILFSGNDYMGLSSHPAIRHAAVKAAEEYGMGPRGSALICGYTTYH 125
Query: 392 LELEERLAKFLEVEETCVYSYGFS 463
+EE LA+ + E+ + GFS
Sbjct: 126 KMVEESLAELKKKEDCLLCPTGFS 149
>01_07_0051 -
40759529-40759624,40759728-40759835,40759972-40760138,
40760670-40760796,40760885-40761046,40761235-40761398,
40761561-40761654,40761736-40761860,40762304-40762449,
40762796-40762884,40763453-40763518,40763824-40763973
Length = 497
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 LNFGSTSFLSLDK-NETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVE 433
LN GS ++L +E +++++KY +C R G +H+ELEE +A+F+
Sbjct: 111 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKP 170
Query: 434 ETCVYSYGFSTIASAIPS 487
++ G+ T ++ IP+
Sbjct: 171 AAILFGMGYVTNSAIIPA 188
>11_04_0455 +
17903921-17904046,17904149-17904214,17905028-17905116,
17905513-17905658,17905743-17905867,17905964-17906057,
17906144-17906307,17906449-17906610,17906683-17906809,
17906854-17906862,17906912-17907078,17907113-17907307,
17907398-17907490
Length = 520
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 257 LNFGSTSFLSLDK-NETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVE 433
LN GS ++L +E +++++KY +C R GT +H ELEE +A+F+
Sbjct: 103 LNLGSYNYLGFAAADEYCTPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKP 162
Query: 434 ETCVYSYGFSTIASAIP 484
++ G+ T ++ IP
Sbjct: 163 AAILFGMGYVTNSAIIP 179
>08_02_0005 + 11190901-11191896
Length = 331
Score = 30.3 bits (65), Expect = 0.90
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 171 PIEWNPKPLVEYDVEVEEPLIMGTLNEN 254
PIE PK +VE+ + +EE L +G + E+
Sbjct: 185 PIEATPKDIVEFKMHIEELLKLGAIRES 212
>11_06_0272 +
21806681-21806908,21806991-21807233,21807318-21807444,
21807822-21808036
Length = 270
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -1
Query: 366 PLGPHEPTPYFSIAFKALSMIVSFLSKDKKLVEPKFKNFHLMFPLLEVPRLPHHTRP 196
PL P E T + F+ + ++ DK V+ K L P LEVPR+P + RP
Sbjct: 182 PLPPVELTATLAHKFEIIGTSSIKITFDKTTVKTKGNLSQL--PPLEVPRIPDNLRP 236
>04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 120 LWSKKRTRSHVLRSNEK--PIEWNPKPLVEYDVEVEEPLIMGTLNEN 254
L S++R + L+ K PIE PK + E+ + +EE L +G + E+
Sbjct: 944 LESEERINEYELKYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRES 990
>12_02_1003 -
25183468-25184010,25184295-25184551,25184795-25184971,
25185438-25185905,25186720-25186730,25187589-25187599
Length = 488
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 171 PIEWNPKPLVEYDVEVEEPLIMGTLNEN 254
PIE PK + E+ + +EE L +G + E+
Sbjct: 117 PIEATPKDIEEFKMHIEELLKLGAIRES 144
>11_03_0063 + 9515666-9516656,9517503-9518599
Length = 695
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 171 PIEWNPKPLVEYDVEVEEPLIMGTLNEN 254
PIE PK + E+ + +EE L +G + E+
Sbjct: 580 PIEATPKDIEEFKMHIEELLKLGAIRES 607
>09_01_0073 -
1057560-1058043,1058199-1058385,1058754-1059062,
1059427-1060269,1061572-1062552,1063189-1063516
Length = 1043
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 171 PIEWNPKPLVEYDVEVEEPLIMGTLNEN 254
PIE PK + E+ + +EE L +G + E+
Sbjct: 637 PIEATPKDIEEFKMHIEELLKLGAIRES 664
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 171 PIEWNPKPLVEYDVEVEEPLIMGTLNEN 254
PIE PK + E+ + +EE L +G + E+
Sbjct: 354 PIEATPKDIEEFKMHIEELLKLGAIRES 381
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 171 PIEWNPKPLVEYDVEVEEPLIMGTLNEN 254
PIE PK + E+ + +EE L +G + E+
Sbjct: 917 PIEATPKDIEEFKMHIEELLKLGAIRES 944
>11_08_0020 -
27711598-27711669,27711854-27711970,27712088-27712204,
27712482-27712572,27712770-27712851,27712926-27713039,
27713155-27713206,27713321-27713563,27713654-27713830,
27714672-27714770
Length = 387
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -1
Query: 369 KPLGPHEPTPYFSIAFKALSMIVSFLSKDKKLVEPKFKNFHLMFPLLEVPRLPHHTRPMV 190
+P PH+ Y SI + L +SF +E + +F E P P P++
Sbjct: 108 EPFVPHDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTIFLSTEKPMTPDACAPLI 167
>11_08_0036 +
27850822-27850920,27851773-27851949,27852040-27852282,
27852397-27852448,27852560-27852674,27852749-27852830,
27853023-27853118,27853212-27853313,27853397-27853513,
27853631-27853747,27853933-27854004
Length = 423
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -1
Query: 369 KPLGPHEPTPYFSIAFKALSMIVSFLSKDKKLVEPKFKNFHLMFPLLEVPRLPHHTRPMV 190
+P PH+ Y SI + L +SF +E + +F E P P P++
Sbjct: 108 EPFVPHDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTIFLPTEKPMTPDACAPLI 167
>11_02_0104 + 8329231-8329902
Length = 223
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 391 MHIYSAIKASRSTRAYTILFHSLQSAVYDCFIFIQ 287
+++ + + R+Y FH A Y CF FI+
Sbjct: 105 VNLQPCVPPTNEVRSYATSFHGTGKAEYRCFTFIR 139
>11_02_0097 - 8285425-8286090
Length = 221
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 391 MHIYSAIKASRSTRAYTILFHSLQSAVYDCFIFIQ 287
+++ + + R+Y FH A Y CF FI+
Sbjct: 104 VNLQPCVPPTNKVRSYATSFHGTGKAEYRCFTFIR 138
>11_02_0094 - 8250460-8250819
Length = 119
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 391 MHIYSAIKASRSTRAYTILFHSLQSAVYDCFIFIQ 287
+++ + + R+Y FH A Y CF FI+
Sbjct: 2 VNLQPCVPPTNEVRSYATSFHGTGKAEYRCFTFIR 36
>11_02_0093 - 8238947-8239615
Length = 222
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 373 IKASRSTRAYTILFHSLQSAVYDCFIFIQ 287
+ + R Y FH + A Y CF FI+
Sbjct: 111 VPPTNEVRCYATSFHGTRKAEYRCFTFIR 139
>03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689
Length = 328
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 222 PRLPHHTRPMVLGSTQLAS 166
P LP H RP+ L ST +AS
Sbjct: 13 PSLPSHRRPLFLPSTSIAS 31
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,650,138
Number of Sequences: 37544
Number of extensions: 279348
Number of successful extensions: 755
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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