Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1338X
(498 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010234-1|AAQ23552.1| 468|Drosophila melanogaster RE58623p pro... 119 2e-27
AE013599-1649|AAF58417.1| 468|Drosophila melanogaster CG4016-PC... 119 2e-27
AE013599-1648|AAM68597.1| 468|Drosophila melanogaster CG4016-PB... 119 2e-27
AE013599-1647|AAM68596.1| 468|Drosophila melanogaster CG4016-PA... 119 2e-27
AY089589-1|AAL90327.1| 247|Drosophila melanogaster RE16411p pro... 56 2e-08
AE014296-2033|AAF50007.2| 417|Drosophila melanogaster CG10361-P... 56 2e-08
AY095191-1|AAM12284.1| 597|Drosophila melanogaster LD36009p pro... 36 0.030
AE014134-2606|AAF53465.1| 597|Drosophila melanogaster CG4162-PA... 36 0.030
AB017359-1|BAA83721.1| 597|Drosophila melanogaster serine palmi... 36 0.030
AF267746-1|AAF82099.1| 715|Drosophila melanogaster rad21 mitoti... 29 2.6
AF186473-1|AAF01417.1| 715|Drosophila melanogaster mitotic cohe... 29 2.6
AF132146-1|AAD33593.1| 715|Drosophila melanogaster DNA repair p... 29 2.6
AF109926-1|AAD04175.1| 715|Drosophila melanogaster rad21 mitoti... 29 2.6
AY089261-1|AAL89999.1| 518|Drosophila melanogaster AT04747p pro... 29 4.6
AE014298-1938|AAF48300.2| 518|Drosophila melanogaster CG15760-P... 29 4.6
BT025839-1|ABF85739.1| 462|Drosophila melanogaster IP11774p pro... 28 8.1
BT022548-1|AAY54964.1| 462|Drosophila melanogaster IP11874p pro... 28 8.1
>BT010234-1|AAQ23552.1| 468|Drosophila melanogaster RE58623p
protein.
Length = 468
Score = 119 bits (287), Expect = 2e-27
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +2
Query: 257 LNFGSTSFLSLDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVEE 436
LN GS ++L +++ I++ A K++ KYGVGSCGPRGFYGT+DVHL+LE+R+AKF+ +EE
Sbjct: 97 LNLGSHNYLGFLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEE 156
Query: 437 TCVYSYGFSTIASAIPSYAK 496
VYSYGFST+ASAIP+YAK
Sbjct: 157 AIVYSYGFSTVASAIPAYAK 176
>AE013599-1649|AAF58417.1| 468|Drosophila melanogaster CG4016-PC,
isoform C protein.
Length = 468
Score = 119 bits (287), Expect = 2e-27
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +2
Query: 257 LNFGSTSFLSLDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVEE 436
LN GS ++L +++ I++ A K++ KYGVGSCGPRGFYGT+DVHL+LE+R+AKF+ +EE
Sbjct: 97 LNLGSHNYLGFLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEE 156
Query: 437 TCVYSYGFSTIASAIPSYAK 496
VYSYGFST+ASAIP+YAK
Sbjct: 157 AIVYSYGFSTVASAIPAYAK 176
>AE013599-1648|AAM68597.1| 468|Drosophila melanogaster CG4016-PB,
isoform B protein.
Length = 468
Score = 119 bits (287), Expect = 2e-27
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +2
Query: 257 LNFGSTSFLSLDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVEE 436
LN GS ++L +++ I++ A K++ KYGVGSCGPRGFYGT+DVHL+LE+R+AKF+ +EE
Sbjct: 97 LNLGSHNYLGFLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEE 156
Query: 437 TCVYSYGFSTIASAIPSYAK 496
VYSYGFST+ASAIP+YAK
Sbjct: 157 AIVYSYGFSTVASAIPAYAK 176
>AE013599-1647|AAM68596.1| 468|Drosophila melanogaster CG4016-PA,
isoform A protein.
Length = 468
Score = 119 bits (287), Expect = 2e-27
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +2
Query: 257 LNFGSTSFLSLDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVEE 436
LN GS ++L +++ I++ A K++ KYGVGSCGPRGFYGT+DVHL+LE+R+AKF+ +EE
Sbjct: 97 LNLGSHNYLGFLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEE 156
Query: 437 TCVYSYGFSTIASAIPSYAK 496
VYSYGFST+ASAIP+YAK
Sbjct: 157 AIVYSYGFSTVASAIPAYAK 176
>AY089589-1|AAL90327.1| 247|Drosophila melanogaster RE16411p
protein.
Length = 247
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +2
Query: 251 KFLNFGSTSFLSLDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEV 430
K LNF + ++L L N I++ + K +E+YG G R GT D+H +LE+++A+F
Sbjct: 65 KILNFCANNYLGLANNPEIVEHSQKLLEQYGAGLSSVRFICGTQDIHKQLEKKIAQFHGR 124
Query: 431 EETCVYSYGFSTIA 472
E+T +Y+ F A
Sbjct: 125 EDTILYASCFDANA 138
>AE014296-2033|AAF50007.2| 417|Drosophila melanogaster CG10361-PA
protein.
Length = 417
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +2
Query: 251 KFLNFGSTSFLSLDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEV 430
K LNF + ++L L N I++ + K +E+YG G R GT D+H +LE+++A+F
Sbjct: 65 KILNFCANNYLGLANNPEIVEHSQKLLEQYGAGLSSVRFICGTQDIHKQLEKKIAQFHGR 124
Query: 431 EETCVYSYGFSTIA 472
E+T +Y+ F A
Sbjct: 125 EDTILYASCFDANA 138
>AY095191-1|AAM12284.1| 597|Drosophila melanogaster LD36009p
protein.
Length = 597
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 LNFGSTSFLSLDK-NETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVE 433
LN GS ++L D + ++ G+ C R G + ELE A++ VE
Sbjct: 216 LNLGSYNYLGFAAATGQCADDSEESARSSGLAYCSSRCELGDNEQLQELEALTARYFGVE 275
Query: 434 ETCVYSYGFSTIASAIPS 487
+ V+ GF+T A +PS
Sbjct: 276 DAIVFGMGFATNALNLPS 293
>AE014134-2606|AAF53465.1| 597|Drosophila melanogaster CG4162-PA
protein.
Length = 597
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 LNFGSTSFLSLDK-NETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVE 433
LN GS ++L D + ++ G+ C R G + ELE A++ VE
Sbjct: 216 LNLGSYNYLGFAAATGQCADDSEESARSSGLAYCSSRCELGDNEQLQELEALTARYFGVE 275
Query: 434 ETCVYSYGFSTIASAIPS 487
+ V+ GF+T A +PS
Sbjct: 276 DAIVFGMGFATNALNLPS 293
>AB017359-1|BAA83721.1| 597|Drosophila melanogaster serine
palmitoyl transferase LCB2subunit protein.
Length = 597
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 LNFGSTSFLSLDK-NETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEERLAKFLEVE 433
LN GS ++L D + ++ G+ C R G + ELE A++ VE
Sbjct: 216 LNLGSYNYLGFAAATGQCADDSEESARSSGLAYCSSRCELGDNEQLQELEALTARYFGVE 275
Query: 434 ETCVYSYGFSTIASAIPS 487
+ V+ GF+T A +PS
Sbjct: 276 DAIVFGMGFATNALNLPS 293
>AF267746-1|AAF82099.1| 715|Drosophila melanogaster rad21 mitotic
cohesin protein.
Length = 715
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 123 WSKKRTRSHVLRSN-EKPIEWNPKPLVEYDVEVEEPLIMGTL 245
W KK T++HV +N EK +E +P V+ + L++G +
Sbjct: 23 WDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLLLGVV 64
>AF186473-1|AAF01417.1| 715|Drosophila melanogaster mitotic cohesin
SCC1 protein.
Length = 715
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 123 WSKKRTRSHVLRSN-EKPIEWNPKPLVEYDVEVEEPLIMGTL 245
W KK T++HV +N EK +E +P V+ + L++G +
Sbjct: 23 WDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLLLGVV 64
>AF132146-1|AAD33593.1| 715|Drosophila melanogaster DNA repair
protein Rad21 protein.
Length = 715
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 123 WSKKRTRSHVLRSN-EKPIEWNPKPLVEYDVEVEEPLIMGTL 245
W KK T++HV +N EK +E +P V+ + L++G +
Sbjct: 23 WDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLLLGVV 64
>AF109926-1|AAD04175.1| 715|Drosophila melanogaster rad21 mitotic
cohesin protein.
Length = 715
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 123 WSKKRTRSHVLRSN-EKPIEWNPKPLVEYDVEVEEPLIMGTL 245
W KK T++HV +N EK +E +P V+ + L++G +
Sbjct: 23 WDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLLLGVV 64
>AY089261-1|AAL89999.1| 518|Drosophila melanogaster AT04747p
protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 69 WWTLVIALQVVFITTYYLWSKKRT 140
+W +V+A+ + + Y LW K+RT
Sbjct: 78 FWCVVVAIILAILCAYSLWKKRRT 101
>AE014298-1938|AAF48300.2| 518|Drosophila melanogaster CG15760-PA
protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 69 WWTLVIALQVVFITTYYLWSKKRT 140
+W +V+A+ + + Y LW K+RT
Sbjct: 78 FWCVVVAIILAILCAYSLWKKRRT 101
>BT025839-1|ABF85739.1| 462|Drosophila melanogaster IP11774p
protein.
Length = 462
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 287 LDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEER 409
L + T+ID L+ K+ SC G+ ++D ELE+R
Sbjct: 422 LTTSTTVIDDELEQHIKHCSCSCNHMGYGNSMDYQAELEKR 462
>BT022548-1|AAY54964.1| 462|Drosophila melanogaster IP11874p
protein.
Length = 462
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 287 LDKNETIIDSALKAMEKYGVGSCGPRGFYGTIDVHLELEER 409
L + T+ID L+ K+ SC G+ ++D ELE+R
Sbjct: 422 LTTSTTVIDDELEQHIKHCSCSCNHMGYGNSMDYQAELEKR 462
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,823,943
Number of Sequences: 53049
Number of extensions: 481781
Number of successful extensions: 1211
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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