Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1332
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    26   0.38 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    26   0.38 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           26   0.38 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.7  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -1

Query: 148 GNV*TRATYVRYETNTIAVQ-HSSCSLCHRSFIN-AGSDEMTERNI 17
           GN  TR TY RY+T  +  + H +  L  R  I  A S  +TER I
Sbjct: 182 GNKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQI 227


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -1

Query: 148 GNV*TRATYVRYETNTIAVQ-HSSCSLCHRSFIN-AGSDEMTERNI 17
           GN  TR TY RY+T  +  + H +  L  R  I  A S  +TER I
Sbjct: 182 GNKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQI 227


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -1

Query: 148 GNV*TRATYVRYETNTIAVQ-HSSCSLCHRSFIN-AGSDEMTERNI 17
           GN  TR TY RY+T  +  + H +  L  R  I  A S  +TER I
Sbjct: 182 GNKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQI 227


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -3

Query: 650 IDIDSNVTNIDHNKHINLYSSKLMEIQLYTMTQYKTITKQVIISIICRQ 504
           I ID NV  +   K  N+ SSK +++ +  ++  +    Q+ + I+C Q
Sbjct: 172 IYIDDNVKGL--GKQYNIASSKTLKLSINIISLVQLWIFQLYLLILCDQ 218


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 505 CLHMIDMITCLVIVLYCV 558
           CL+++ + T + ++LYCV
Sbjct: 320 CLNILSIFTYVPMILYCV 337


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 505 CLHMIDMITCLVIVLYCV 558
           CL+++ + T + ++LYCV
Sbjct: 45  CLNILSIFTYVPMILYCV 62


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 304 IIRKYCDVTKLLRTYYLHI 248
           I+++YC V  +  TY+ +I
Sbjct: 72  ILQRYCSVLLVFLTYFFNI 90


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 304 IIRKYCDVTKLLRTYYLHI 248
           I+++YC V  +  TY+ +I
Sbjct: 68  ILQRYCSVLLVFLTYFFNI 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,148
Number of Sequences: 336
Number of extensions: 3176
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)