Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1328
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     26   0.43 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.56 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   4.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   4.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   7.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   7.0  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 636 KRHLRQYQKWKLLHNGRNYKNHLNTTLF*PKPH 538
           +R + + +K  LL NG N+  HL+   F   PH
Sbjct: 89  RRDMSRLEKSPLLANGYNHSPHLSHMQFMQLPH 121


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 268 FVVLHRCTIKHI--FNQYQILAHVFLSFFS 185
           +++   CT+  +  FN YQ LAH    FF+
Sbjct: 502 YLMFDYCTVLRVQRFNNYQSLAHYLRVFFT 531


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
 Frame = -2

Query: 86  KATWAGDISNYVYIRLY-----FWINYCNFQYH 3
           K T A   + YV +RL      FW+ +C+F +H
Sbjct: 644 KDTIAVPNNGYVVLRLRANNPGFWLFHCHFLFH 676


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 445 TKPEILFTLMSGYEHQEIASNLARCCENVLD 537
           T   I +TLM    H+E+   + +  E VLD
Sbjct: 303 TSVSICYTLMLLANHREVQEEILKEMEAVLD 333


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 445 TKPEILFTLMSGYEHQEIASNLARCCENVLD 537
           T   I +TLM    H+E+   + +  E VLD
Sbjct: 303 TSVSICYTLMLLANHREVQEEILKEMEAVLD 333


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 380 WATSFFPSKSIRFKFCIKSSNKLVLYISCAN 288
           W + +  +K    +  +  +NKLVL + C N
Sbjct: 152 WLSRYSWAKVFLVEHILVQTNKLVLALECNN 182


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 380 WATSFFPSKSIRFKFCIKSSNKLVLYISCAN 288
           W + +  +K    +  +  +NKLVL + C N
Sbjct: 152 WLSRYSWAKVFLVEHILVQTNKLVLALECNN 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,539
Number of Sequences: 336
Number of extensions: 4014
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)