Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1327X
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.50 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    25   0.50 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.1  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 341 QVIKKNT-MLKGQLSQLFIEYNEVLETNKKLQIV 439
           QV K N    K  LSQ+ I +NE+L T+ ++Q +
Sbjct: 204 QVCKLNNGHYKNFLSQVEIIHNEILVTHNEIQTI 237


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 341 QVIKKNT-MLKGQLSQLFIEYNEVLETNKKLQIV 439
           QV K N    K  LSQ+ I +NE+L T+ ++Q +
Sbjct: 29  QVCKLNNGHYKNFLSQVEIIHNEILVTHNEIQTI 62


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -2

Query: 265 KSHLSWSST*RALVPLVIILDLYKII 188
           +++++W S    +VPLV+++  Y  I
Sbjct: 201 RAYVTWYSISVFMVPLVVLIFTYTSI 226


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 405 SLYSMKS*DNWPFN 364
           S+YS    ++WPFN
Sbjct: 155 SVYSRHPYESWPFN 168


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 486 WSDSTYSALH 457
           WSD  Y+A+H
Sbjct: 311 WSDRIYAAIH 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,536
Number of Sequences: 336
Number of extensions: 1498
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)