Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1327X
(497 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D63997-1|BAA23661.1| 1530|Homo sapiens GCP170 protein. 31 2.2
BC146675-1|AAI46676.1| 1134|Homo sapiens GOLGA3 protein protein. 31 2.2
BC142658-1|AAI42659.1| 1134|Homo sapiens GOLGA3 protein protein. 31 2.2
BC060826-1|AAH60826.1| 843|Homo sapiens GOLGA3 protein protein. 31 2.2
AF485338-1|AAL93149.1| 1498|Homo sapiens golgin-160 protein. 31 2.2
AB027133-1|BAB71953.1| 1390|Homo sapiens male enhanced antigen-2... 31 2.2
BC009941-1|AAH09941.1| 550|Homo sapiens coiled-coil domain cont... 30 3.9
BC008285-1|AAH08285.1| 550|Homo sapiens coiled-coil domain cont... 30 3.9
BC117174-1|AAI17175.1| 1291|Homo sapiens KIF15 protein protein. 29 6.8
AK027816-1|BAB55389.1| 436|Homo sapiens protein ( Homo sapiens ... 29 6.8
AB035898-1|BAB03309.1| 1388|Homo sapiens kinesin-like protein 2 ... 29 6.8
>D63997-1|BAA23661.1| 1530|Homo sapiens GCP170 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 320 DNEVETLQVIKKNTMLKGQLSQLFIEYNEVLETNKKLQ 433
+ + E LQV+K+ L+GQL L +E ++ L+ +LQ
Sbjct: 402 ETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQ 439
>BC146675-1|AAI46676.1| 1134|Homo sapiens GOLGA3 protein protein.
Length = 1134
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 320 DNEVETLQVIKKNTMLKGQLSQLFIEYNEVLETNKKLQ 433
+ + E LQV+K+ L+GQL L +E ++ L+ +LQ
Sbjct: 402 ETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQ 439
>BC142658-1|AAI42659.1| 1134|Homo sapiens GOLGA3 protein protein.
Length = 1134
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 320 DNEVETLQVIKKNTMLKGQLSQLFIEYNEVLETNKKLQ 433
+ + E LQV+K+ L+GQL L +E ++ L+ +LQ
Sbjct: 402 ETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQ 439
>BC060826-1|AAH60826.1| 843|Homo sapiens GOLGA3 protein protein.
Length = 843
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 320 DNEVETLQVIKKNTMLKGQLSQLFIEYNEVLETNKKLQ 433
+ + E LQV+K+ L+GQL L +E ++ L+ +LQ
Sbjct: 402 ETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQ 439
>AF485338-1|AAL93149.1| 1498|Homo sapiens golgin-160 protein.
Length = 1498
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 320 DNEVETLQVIKKNTMLKGQLSQLFIEYNEVLETNKKLQ 433
+ + E LQV+K+ L+GQL L +E ++ L+ +LQ
Sbjct: 402 ETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQ 439
>AB027133-1|BAB71953.1| 1390|Homo sapiens male enhanced antigen-2
protein.
Length = 1390
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 320 DNEVETLQVIKKNTMLKGQLSQLFIEYNEVLETNKKLQ 433
+ + E LQV+K+ L+GQL L +E ++ L+ +LQ
Sbjct: 402 ETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQ 439
>BC009941-1|AAH09941.1| 550|Homo sapiens coiled-coil domain
containing 102A protein.
Length = 550
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 263 LQQLKTSREQCQQ-LLKEREDNEVETLQVIKKNTMLKGQLSQLFIEYNEVLETNKKL 430
L L+ ++ Q+ LLKERED L + + L+G+LSQ I+Y E+ +T +++
Sbjct: 252 LTALRLRLDESQKVLLKEREDK----LALSRNIEKLEGELSQWKIKYEELSKTKQEM 304
>BC008285-1|AAH08285.1| 550|Homo sapiens coiled-coil domain
containing 102A protein.
Length = 550
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 263 LQQLKTSREQCQQ-LLKEREDNEVETLQVIKKNTMLKGQLSQLFIEYNEVLETNKKL 430
L L+ ++ Q+ LLKERED L + + L+G+LSQ I+Y E+ +T +++
Sbjct: 252 LTALRLRLDESQKVLLKEREDK----LALSRNIEKLEGELSQWKIKYEELSKTKQEM 304
>BC117174-1|AAI17175.1| 1291|Homo sapiens KIF15 protein protein.
Length = 1291
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +2
Query: 296 QQLLKEREDNEVETLQVIKKNTMLKGQLSQL 388
++ L+E E+ +E+ Q+I+KN +L+GQL +
Sbjct: 1098 KEQLREMENLRLESQQLIEKNWLLQGQLDDI 1128
>AK027816-1|BAB55389.1| 436|Homo sapiens protein ( Homo sapiens
cDNA FLJ14910 fis, clone PLACE1006368, weakly similar to
HYALURONAN-MEDIATED MOTILITY RECEPTOR. ).
Length = 436
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +2
Query: 296 QQLLKEREDNEVETLQVIKKNTMLKGQLSQL 388
++ L+E E+ +E+ Q+I+KN +L+GQL +
Sbjct: 243 KEQLREMENLRLESQQLIEKNWLLQGQLDDI 273
>AB035898-1|BAB03309.1| 1388|Homo sapiens kinesin-like protein 2
protein.
Length = 1388
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +2
Query: 296 QQLLKEREDNEVETLQVIKKNTMLKGQLSQL 388
++ L+E E+ +E+ Q+I+KN +L+GQL +
Sbjct: 1195 KEQLREMENLRLESQQLIEKNWLLQGQLDDI 1225
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,099,084
Number of Sequences: 237096
Number of extensions: 827998
Number of successful extensions: 6293
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6293
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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