Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1315
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   3.5  
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        23   6.1  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.1  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 476 YNYPFSSVSCSYPTLRSVQNVLLSCRISVYDQ 381
           Y  PF  V    PT+  ++ V L+ R+   DQ
Sbjct: 278 YQLPFYDVVQPDPTIEEMRKVRLAARVVCVDQ 309


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 624 CSRTFYYECSIQCQL 580
           CS TF++ C ++C+L
Sbjct: 74  CSCTFHWCCEVKCKL 88


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 66  DMSSKVSV*LQQLPHPSNRNALLLH 140
           D S    V LQQL  P NR  L LH
Sbjct: 826 DGSGGFRVPLQQLALPRNRGGLNLH 850


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,398
Number of Sequences: 2352
Number of extensions: 12054
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)