Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1314
         (810 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.8  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   6.4  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   6.4  
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    23   8.4  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -2

Query: 491  SCRRGAGILFPTTACHGPHSLRGRDSWTPEGSH 393
            SC R AG  F  T+     S   R S +  GSH
Sbjct: 1330 SCERIAGETFECTSTSSKFSTSSRGSGSDSGSH 1362


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +2

Query: 479 LAYKIKYPENSFFYAETTSVP----ASIGFMGFTMSAKGGITLNYGRRSQTASTVFPL 640
           + + I+    + +Y     VP    +S+  +GFT+    G  L  G     + TVF L
Sbjct: 221 ITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGLTILVSQTVFSL 278


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +3

Query: 147  YPMADRDTDELNIDNVI---KKLLKVRGEKPGMNVQLTE*KLKGY 272
            Y M  +D D   +   +   K +LK++  K  +N  LTE K K Y
Sbjct: 961  YDMPTKDGDVFKLHYKVQNNKYVLKLKSMKGPLNNSLTEQKQKSY 1005


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 805 PQPAVSLSGSDQSKCRANPGRERP 734
           P P +++SGSD S   A  G   P
Sbjct: 159 PSPPITVSGSDMSSPGAPTGSSSP 182


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 422 RDSWTPEGSHHTQTT 378
           ++ W PE +HH Q T
Sbjct: 37  KEKWVPEITHHCQKT 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 914,172
Number of Sequences: 2352
Number of extensions: 20635
Number of successful extensions: 48
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)