Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1308X
(406 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19550.1 68415.m02284 esterase/lipase/thioesterase family pro... 29 1.6
At4g05120.1 68417.m00761 equilibrative nucleoside transporter, p... 28 2.1
At1g55500.1 68414.m06349 expressed protein contains Pfam profile... 27 3.6
At5g66640.1 68418.m08399 LIM domain-containing protein-related c... 27 4.8
At5g11700.1 68418.m01367 glycine-rich protein predicted protein,... 27 4.8
At4g05110.1 68417.m00759 equilibrative nucleoside transporter, p... 27 4.8
At3g03950.2 68416.m00414 expressed protein contains Pfam profile... 27 4.8
At3g03950.1 68416.m00413 expressed protein contains Pfam profile... 27 4.8
At5g61020.2 68418.m07656 YT521-B-like family protein contains Pf... 27 6.3
At5g61020.1 68418.m07655 YT521-B-like family protein contains Pf... 27 6.3
At3g13460.2 68416.m01694 expressed protein contains Pfam profile... 26 8.3
At3g13460.1 68416.m01693 expressed protein contains Pfam profile... 26 8.3
At1g43660.1 68414.m05012 hypothetical protein 26 8.3
>At2g19550.1 68415.m02284 esterase/lipase/thioesterase family
protein low similarity to cinnamoyl ester hydrolase CinI
[Butyrivibrio fibrisolvens] GI:1622732; contains
esterase/lipase/thioesterase active site serine
(PS50187) (Interpro entry IPR000379) and alpha/beta
hydrolase fold (PF00561).
Length = 332
Score = 28.7 bits (61), Expect = 1.6
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -3
Query: 320 MFEVSWHISLLENKSSMAPLG*VFKIDNSQSRKYKKMKQFFF--LGFKILLAL 168
M V++++S+ ++ + PL +FK++N SR + + FF L K+LL L
Sbjct: 271 MIVVTFYMSVFDHLIKVYPLLVIFKLENVMSRIQQLIYLIFFYLLRIKLLLGL 323
>At4g05120.1 68417.m00761 equilibrative nucleoside transporter,
putative (ENT3) identical to putative equilibrative
nucleoside transporter ENT3 [Arabidopsis thaliana]
GI:16518993; contains similarity to SWISS-PROT:O54699
equilibrative nucleoside transporter 2 (Equilibrative
nitrobenzylmercaptopurine riboside-insensitive
nucleoside transporter, Equilibrative NBMPR-insensitive
nucleoside transporter, Nucleoside transporter, ei-type)
[Rattus norvegicus]; contains Pfam profile PF01733:
Nucleoside transporter
Length = 418
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -3
Query: 242 DNSQSRKYKKMKQFFFLGFKILLALKKGHDDVITTQSQN---FLLHT*ATMLLILLDM 78
D SR + Q F LG ++LA H+ I T+ +N ++L T +T LLI+LD+
Sbjct: 50 DYHPSRVLTLVYQPFALGTILILAY---HESKINTRKRNLIGYILFTISTFLLIVLDL 104
>At1g55500.1 68414.m06349 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 549
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 147 HNDTKSKFPTPYIGHDVINTIRYGLW*LKPNQNKK 43
+ D K Y DV +I+Y +W PN NKK
Sbjct: 355 YKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKK 389
>At5g66640.1 68418.m08399 LIM domain-containing protein-related
contains low similarity to Pfam profile PF00412: LIM
domain
Length = 450
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 253 CSKLITLNLENTRK*NNFFFWDLKYC 176
C + I +N E RK + FW KYC
Sbjct: 134 CQQKIPVNAEGIRKFSEHPFWKEKYC 159
>At5g11700.1 68418.m01367 glycine-rich protein predicted protein,
Arabidopsis thaliana
Length = 1411
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -3
Query: 260 G*VFKIDNSQSRKYKKMKQFFFLGFKILLALKKGHDDVITTQSQNFLLHT*ATMLLILLD 81
G + +D+ S K K+ FF L F + GH D++ LL + +LL LL
Sbjct: 1218 GGIIDLDSLPSLKEKR-DMFFLLSFLVHNTKPVGHQDMVGLVISMLLLGDFSLVLLTLLQ 1276
Query: 80 MDS 72
+ S
Sbjct: 1277 LYS 1279
>At4g05110.1 68417.m00759 equilibrative nucleoside transporter,
putative (ENT6) identical to putative equilibrative
nucleoside transporter ENT6 [Arabidopsis thaliana]
GI:16518997; contains similarity to SWISS-PROT:O54699
equilibrative nucleoside transporter 2 (Equilibrative
nitrobenzylmercaptopurine riboside-insensitive
nucleoside transporter, Equilibrative NBMPR-insensitive
nucleoside transporter, Nucleoside transporter, ei-type)
[Rattus norvegicus]; contains Pfam profile PF01733:
Nucleoside transporter
Length = 418
Score = 27.1 bits (57), Expect = 4.8
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = -3
Query: 296 SLLENKSSMAPLG*VFKI--DNSQSRKYKKMKQFFFLGFKILLALKKGHDDVITTQSQN- 126
SL+ S + +K+ D SR + Q F G ++LA H+ +T+ +N
Sbjct: 30 SLISWNSMLTTADYYYKVFPDYHPSRVLTLVYQPFAFGAIVILAY---HESKTSTRKRNL 86
Query: 125 --FLLHT*ATMLLILLDM 78
++L+T +T LLI+LD+
Sbjct: 87 IGYILYTISTFLLIVLDL 104
>At3g03950.2 68416.m00414 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 424
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 114 YIGHDVINTIRYGLW*LKPNQNKK 43
Y DV N I+YG W P NKK
Sbjct: 249 YSEDDVHNCIKYGAWSSTPTGNKK 272
>At3g03950.1 68416.m00413 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 425
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 114 YIGHDVINTIRYGLW*LKPNQNKK 43
Y DV N I+YG W P NKK
Sbjct: 250 YSEDDVHNCIKYGAWSSTPTGNKK 273
>At5g61020.2 68418.m07656 YT521-B-like family protein contains Pfam
profile PF04146: YT521-B-like family
Length = 493
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -2
Query: 138 TKSKFPT--PYIGHDVINTIRYGLW*LKPNQNKK-KSSHN 28
T++KF Y D+ +I+Y +W PN NKK +S+N
Sbjct: 257 TEAKFYVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDASYN 296
>At5g61020.1 68418.m07655 YT521-B-like family protein contains Pfam
profile PF04146: YT521-B-like family
Length = 495
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -2
Query: 138 TKSKFPT--PYIGHDVINTIRYGLW*LKPNQNKK-KSSHN 28
T++KF Y D+ +I+Y +W PN NKK +S+N
Sbjct: 259 TEAKFYVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDASYN 298
>At3g13460.2 68416.m01694 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 664
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 114 YIGHDVINTIRYGLW*LKPNQNKK 43
Y DV +I+Y +W PN NKK
Sbjct: 447 YSEDDVHKSIKYNVWASTPNGNKK 470
>At3g13460.1 68416.m01693 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 667
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 114 YIGHDVINTIRYGLW*LKPNQNKK 43
Y DV +I+Y +W PN NKK
Sbjct: 450 YSEDDVHKSIKYNVWASTPNGNKK 473
>At1g43660.1 68414.m05012 hypothetical protein
Length = 94
Score = 26.2 bits (55), Expect = 8.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 244 ILNTQPKGAILDLFSSNEICHDTSN 318
+L T+P+ F+SN +C D +N
Sbjct: 15 LLKTEPRTRCRAFFNSNAVCEDVNN 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,880,114
Number of Sequences: 28952
Number of extensions: 148370
Number of successful extensions: 328
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 595686720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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