Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1306
(748 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahym... 40 0.065
UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein PF07_0... 37 0.61
UniRef50_Q7R981 Cluster: Putative uncharacterized protein PY0698... 33 5.6
UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, who... 33 5.6
UniRef50_A0J3X4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_A5AK12 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma g... 33 7.5
UniRef50_Q7SEK3 Cluster: Predicted protein; n=5; Pezizomycotina|... 33 7.5
UniRef50_O74552 Cluster: Vacuolar protein sorting-associated pro... 33 7.5
UniRef50_Q0AVA0 Cluster: Serine phosphatase RsbU regulator of si... 33 9.9
UniRef50_Q8I338 Cluster: Putative uncharacterized protein PFI055... 33 9.9
>UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahymena
thermophila SB210|Rep: KOW motif family protein -
Tetrahymena thermophila SB210
Length = 778
Score = 39.9 bits (89), Expect = 0.065
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 13 SDWNCKFVHYYDCILYFYNHKFRQDYTIKNIN 108
S + C+ +H Y +++ +N KFR YT++NIN
Sbjct: 623 SGYQCQVIHVYKSLVFLFNPKFRDTYTVENIN 654
>UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein
PF07_0118; n=3; Plasmodium|Rep: Putative uncharacterized
protein PF07_0118 - Plasmodium falciparum (isolate 3D7)
Length = 5561
Score = 36.7 bits (81), Expect = 0.61
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 22 NCKFVHYYDCILYFYNHKFRQDYTIKNINKDKQYFIYSQFDNRRQEQ 162
N +FV Y I FY++ F I N +KD QYF YS ++N + Q
Sbjct: 401 NIQFVLPYKPIRMFYSNNFLFFVNIINKSKDLQYFTYSIYNNNHKNQ 447
>UniRef50_Q7R981 Cluster: Putative uncharacterized protein PY06983;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY06983 - Plasmodium yoelii yoelii
Length = 548
Score = 33.5 bits (73), Expect = 5.6
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Frame = +1
Query: 22 NCKFVHYYDCILYFYNHKFRQDYTIKNI-NKDKQYFIYSQFDNRRQEQKFDNK*YACVCA 198
N ++YY +Y N K Y KNI +++K+ IY + + + +N Y +
Sbjct: 436 NMNRLNYYSINIYDKNKKKNISYKSKNIEDENKKNNIYDKENGEINDYIKNNSFYINIEN 495
Query: 199 SNTWYAVCVMFSL------LI*CIYMHYFKK 273
N A+C + L ++ C YMHY+ K
Sbjct: 496 ENYMCAICFVDYLDDDHICVLPCNYMHYYHK 526
>UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 853
Score = 33.5 bits (73), Expect = 5.6
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 52 ILYFYNHKFRQDYTIKNINKDKQYFIYS 135
+ YF+N++F Q T +N+N + QY IYS
Sbjct: 312 LTYFHNNQFIQGITEQNLNSNLQYIIYS 339
>UniRef50_A0J3X4 Cluster: Putative uncharacterized protein; n=1;
Shewanella woodyi ATCC 51908|Rep: Putative
uncharacterized protein - Shewanella woodyi ATCC 51908
Length = 141
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2
Query: 504 ITRFTPSLSHIIIRTLHPRLFRSTSSPSTLHYHFHTSI 391
I RF P L+H+ IR LH TS P +L +H H I
Sbjct: 85 IERFEPRLTHLDIRVLH-----DTSCPFSLRFHIHGKI 117
>UniRef50_A5AK12 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 626
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -3
Query: 617 ELIRRFEGGQNQAQRFRCIHTSEANKSVFIKKVAEINRSRVSLP---LSLISSFAHSILV 447
E++R+F+ Q + + + +S +K I+ +++I + P + ++++ + +V
Sbjct: 152 EILRQFQSTQARISIWSLLASSSTHKDALIQALSQIRVETTTTPEGLIHMVTAGRATCIV 211
Query: 446 FFDRPLPP 423
FFD LPP
Sbjct: 212 FFDDDLPP 219
>UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S3 - Toxoplasma gondii
Length = 224
Score = 33.1 bits (72), Expect = 7.5
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 28 KFVHYYDCILYFYNHKFRQDYTIKNINKDKQYFIYSQFDN-RRQEQKF 168
KF +CI YFYN+ + IK IN K+ IY + DN +QK+
Sbjct: 68 KFQLNINCIFYFYNYFLKLKIFIKEINNIKR--IYKKIDNLNNLKQKY 113
>UniRef50_Q7SEK3 Cluster: Predicted protein; n=5;
Pezizomycotina|Rep: Predicted protein - Neurospora
crassa
Length = 526
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 97 KNINKDKQYFIYSQFDNRRQEQKFDNK*YACVCASNTWYAVCVMFSLLI 243
KN +K++ + +S +N R E D YA VC W +C++ ++I
Sbjct: 266 KNNSKNQDMWGWSCVENHRAELFKDKVDYALVCRLQNWGLICMIIEIII 314
>UniRef50_O74552 Cluster: Vacuolar protein sorting-associated
protein 35; n=1; Schizosaccharomyces pombe|Rep: Vacuolar
protein sorting-associated protein 35 -
Schizosaccharomyces pombe (Fission yeast)
Length = 785
Score = 33.1 bits (72), Expect = 7.5
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = -3
Query: 548 ANKSVFIKKVAEINRSRVSLPLSLISSFAHSILVFFDRPLPPLPCTTISIHLYIN 384
A + V V E+ +SR LPL I S SIL FF R P P + YIN
Sbjct: 308 AIQEVLWSHVVEVIQSRSGLPLDCIVSILSSILNFFLRCYPYKPQYADRVFQYIN 362
>UniRef50_Q0AVA0 Cluster: Serine phosphatase RsbU regulator of sigma
subunit-like protein precursor; n=1; Syntrophomonas
wolfei subsp. wolfei str. Goettingen|Rep: Serine
phosphatase RsbU regulator of sigma subunit-like protein
precursor - Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 678
Score = 32.7 bits (71), Expect = 9.9
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = -3
Query: 536 VFIKKVAEINRSRVSLPLSLISSFAHSILVFFDRPLPPLPCTTISIHLYINT*SKNFVSL 357
++ K VAEI +S L +SL + +A +I + F+R + L I N+
Sbjct: 48 LYEKNVAEITKSSSKLAISLANYYAQTINIDFERIMGELNTMKGDIETLYNSGGTTHA-- 105
Query: 356 FTKIARTEEYEIFHTYREYREEVH 285
I+R EEY I R+EV+
Sbjct: 106 -IPISRYEEYIISQAAHPSRQEVN 128
>UniRef50_Q8I338 Cluster: Putative uncharacterized protein PFI0555c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0555c - Plasmodium falciparum
(isolate 3D7)
Length = 1218
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 10 RSDWNCKFVHYYDCILYFYNHKFRQDYTIKNINKDKQYF--IYSQFDNRRQEQK 165
R D+ C V+ DC+LY + R+ Y +KN+ K+ F ++Q++ +++ K
Sbjct: 270 RDDYKCGLVNLNDCLLYHCRN--RRAYILKNLFIIKRCFTKFFTQYEENKKKNK 321
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,036,413
Number of Sequences: 1657284
Number of extensions: 11488470
Number of successful extensions: 28358
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 27087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28342
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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