Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1306
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    24   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.5  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   4.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.9  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +1

Query: 31  FVHYYDC---ILYFYNHKFRQDYTIKNINKDKQYFIYSQFDNR--RQEQKFD 171
           F+ Y  C   +LY+   K    +  KN+  DK +  +  F N   R+E  F+
Sbjct: 2   FLAYIACFLLLLYYIYSKHYSYWQSKNVPTDKPFLFFGSFYNLVIRKEHIFE 53


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/37 (27%), Positives = 24/37 (64%)
 Frame = -2

Query: 210 PCI*RTHACILFIVKLLFLTSVVKLRIDEILFVFVNI 100
           P + + +AC+L +VK+L++  +  L+ D +  V+ ++
Sbjct: 41  PSLAKCYACLLMVVKILWV--IYWLQDDALKSVYASL 75


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
 Frame = -2

Query: 186 CILFIVKLLFLT---SV-VKLRIDEILFVF 109
           C+L++V L FLT   S+ +KLR D++  +F
Sbjct: 175 CVLYVVLLHFLTYNLSLGIKLRYDDVNNLF 204


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = -2

Query: 123 ILFVFVNIFYSVVL 82
           ++F+FVN+F+ V++
Sbjct: 97  LIFIFVNVFFWVII 110


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
 Frame = -2

Query: 186 CILFIVKLLFLT---SV-VKLRIDEILFVF 109
           C+L++V L FLT   S+ +KLR D++  +F
Sbjct: 175 CVLYVVLLHFLTYNLSLGIKLRYDDVNNLF 204


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -1

Query: 64  RSIKYNHNSVQTYNSNLTSS 5
           + ++Y +++ Q YNSN+ S+
Sbjct: 58  QQLQYGYHNHQNYNSNVLSN 77


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -1

Query: 64  RSIKYNHNSVQTYNSNLTSS 5
           + ++Y +++ Q YNSN+ S+
Sbjct: 58  QQLQYGYHNHQNYNSNVLSN 77


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 211 YAVCVMFSLLI*CIYMHYFKKILALC 288
           + +  M  L + CIY  Y   I+ LC
Sbjct: 272 FIIFTMHLLFLLCIYYFYCALIILLC 297


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 328 YSSVRAIFVKRDTKFLLHVLIYRCMEMVVQ 417
           Y      F +   +F+++ LIY  +EM++Q
Sbjct: 141 YEQYAVEFFQFYAQFIVYFLIYAVLEMLLQ 170


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -1

Query: 64  RSIKYNHNSVQTYNSNLTSS 5
           + ++Y +++ Q YNSN+ S+
Sbjct: 58  QQLQYGYHNHQNYNSNVLSN 77


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -1

Query: 64  RSIKYNHNSVQTYNSNLTSS 5
           + ++Y +++ Q YNSN+ S+
Sbjct: 58  QQLQYGYHNHQNYNSNVLSN 77


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 566 NGIFELDFDPLQN 604
           N ++ELDFD  +N
Sbjct: 282 NSLYELDFDTFRN 294


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 365 VSLFTKIARTEEYEIFHTYREYREEVHNANIFL 267
           + LF K      Y+IF   ++ +   H+  +FL
Sbjct: 778 IHLFVKCVFLMGYQIFDWVQKEQSLAHSVGVFL 810


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,021
Number of Sequences: 336
Number of extensions: 3583
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)