Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1303
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    26   1.5  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   7.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 46  MLISAVHNLNDPTLWY*NCTKCSIGTFGTR 135
           + +S +  L  P LW  NC  CSI     R
Sbjct: 328 LCVSILGTLITPELWMKNCKSCSISPVSDR 357


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 740 AAKVCQRVQCSLVSYHQKCSCKNTCYCVC 654
           A   C ++ CS +S      C+ +CYC C
Sbjct: 218 ACGTCNQITCSGISTEV---CRRSCYCGC 243


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 618 IIKSCSSFCEVIKG 577
           +++S + FCEV+KG
Sbjct: 184 VLESAAKFCEVLKG 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,033
Number of Sequences: 2352
Number of extensions: 16154
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)