Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1298
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 213  PKSPLRLPCYYANAFEYR 160
            PKS  ++ CY+ N   YR
Sbjct: 1819 PKSEFKVVCYFTNWAWYR 1836


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 534 SLSWNYFLLSHA*ECRDDVFFYNFSALPFLHV 439
           ++ +N FLLS A E  +D+F +      F  V
Sbjct: 192 TVKFNLFLLSQAVETFNDIFGWTILQTVFFTV 223


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 553 WSDHLIFVILELFPTQPRLRMS-R*RFFLQLFRPPLSSRHSQIVRLVEYTLFS 398
           WS ++IF +L++F   P  + +     F+Q    PL+S  + I+    Y LFS
Sbjct: 264 WSPYIIFDLLQVFGQIPGTQTNIAIATFIQSL-APLNSAANPII----YCLFS 311


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -2

Query: 571 YFGL*KWSDHLIFVILELFPTQPRLR 494
           Y  L  ++  L+F++++LF +  R+R
Sbjct: 287 YIVLLTFASDLLFILIQLFNSLRRMR 312


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 539 NFRYPGIISYSATLENVEM 483
           NF  P I+ ++  L+N+E+
Sbjct: 577 NFNIPSILQFNDGLKNLEI 595


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,264
Number of Sequences: 336
Number of extensions: 2599
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)