Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1291
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    24   1.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.3  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   4.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.7  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 215 ITYCKVYIYTSYVW-HTTRL*FLKSFTAFNAQTYVLRLA*NFS*CNVMLFFKSK*DVLHL 39
           +TY  V +Y+ YVW       + + + A   Q Y  +    +  C ++  F+ K   ++L
Sbjct: 120 LTYLLVALYSGYVWTDILGFGYFREYLAEAVQLY-FQFYYTYFLCVIVCIFRGKYRNINL 178

Query: 38  IL 33
           +L
Sbjct: 179 LL 180


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 221 YVITYCKVYIYTSYVW 174
           Y+ TY  V  Y +Y W
Sbjct: 138 YIFTYLSVTCYVTYAW 153


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 126 RVECSKGLQKSQSSSVPNVARIDIDFTICNHVAFRF 233
           +V C  G+  +   +       DID T+C H+ + F
Sbjct: 21  KVVCYHGIWSTYRLNNGKFTVEDIDPTLCTHLIYSF 56


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 189 IDIDFTICNHVAFRF 233
           +D+D T+C H+ + F
Sbjct: 43  LDVDPTLCTHLLYAF 57


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -2

Query: 293 FCHFLCLTISKYIDVSNKIMKTKRYVITYCKVYIYTSYVWHTTRL*FLKS-FTAFN 129
           FC+F+ L    YI  S        +  T  K  I+TS   +T  L  +++ F+  N
Sbjct: 147 FCYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCIYTNLLRIIEADFSKLN 202


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 560 RVECRTEELVILSNG 516
           R EC T E+++  NG
Sbjct: 40  RFECLTNEMIVTKNG 54


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 221 YVITYCKVYIYTSYVW 174
           YVI Y    ++ +YVW
Sbjct: 142 YVILYILATVFLAYVW 157


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 221 YVITYCKVYIYTSYVW 174
           YVI Y    ++ +YVW
Sbjct: 142 YVILYILATVFLAYVW 157


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 192 DIDFTICNHVAFRF 233
           DID  +C HV + F
Sbjct: 44  DIDANLCTHVNYAF 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,337
Number of Sequences: 336
Number of extensions: 3364
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)