Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1291
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450 CY...    26   1.0  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.6  

>AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450
           CYP4D22 protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 614 TNLNVKQKIILLCPHTGPRVECRTEELVILSNGPATGFEHRHSRIARY 471
           T + +   ++LL  H   +     E + I+ N PAT   HR+ +  +Y
Sbjct: 13  TTIAISFTLLLLARHPEVQERVYREVVAIVGNDPATPATHRNLQDMKY 60


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 301 SILFYVIFYLF*KSTLKSFF*RILIMFSLHVFFIL 405
           S L  + FYL   S  K     I I+ SLHVFF+L
Sbjct: 258 SFLTVLTFYLPSDSGEKVTL-SISILISLHVFFLL 291


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 301 SILFYVIFYLF*KSTLKSFF*RILIMFSLHVFFIL 405
           S L  + FYL   S  K     I I+ SLHVFF+L
Sbjct: 258 SFLTVLTFYLPSDSGEKVTL-SISILISLHVFFLL 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,874
Number of Sequences: 2352
Number of extensions: 12787
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)