Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1290X
(437 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O97159 Cluster: Chromodomain-helicase-DNA-binding prote... 115 5e-25
UniRef50_Q22516 Cluster: Chromodomain-helicase-DNA-binding prote... 86 4e-16
UniRef50_Q8TDI0 Cluster: Chromodomain-helicase-DNA-binding prote... 82 4e-15
UniRef50_Q12873 Cluster: Chromodomain-helicase-DNA-binding prote... 78 7e-14
UniRef50_Q4SNF1 Cluster: Chromosome 8 SCAF14543, whole genome sh... 77 2e-13
UniRef50_Q4T5L7 Cluster: Chromosome undetermined SCAF9199, whole... 76 4e-13
UniRef50_Q14839-2 Cluster: Isoform 2 of Q14839 ; n=19; Euteleost... 73 2e-12
UniRef50_A2YA18 Cluster: Putative uncharacterized protein; n=2; ... 44 0.002
UniRef50_Q9S775 Cluster: CHD3-type chromatin-remodeling factor P... 37 0.16
UniRef50_Q5JGD4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.50
UniRef50_UPI0000F1E921 Cluster: PREDICTED: hypothetical protein;... 35 0.66
UniRef50_Q73QQ8 Cluster: ABC transporter, ATP-binding/permease p... 35 0.66
UniRef50_Q6GP10 Cluster: MGC80752 protein; n=1; Xenopus laevis|R... 33 2.0
UniRef50_Q54GX4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.0
UniRef50_Q5A659 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_UPI0000499350 Cluster: hypothetical protein 209.t00004;... 32 4.7
UniRef50_UPI000034F14B Cluster: chromatin remodeling factor, put... 32 4.7
UniRef50_Q9SZ57 Cluster: Putative uncharacterized protein AT4g31... 32 4.7
UniRef50_A7BZQ0 Cluster: Membrane protein; n=1; Beggiatoa sp. PS... 32 6.2
UniRef50_Q5S4W8 Cluster: Putative uncharacterized protein; n=3; ... 32 6.2
UniRef50_Q2SF32 Cluster: Response regulator containing a CheY-li... 31 8.1
UniRef50_Q04UH0 Cluster: Endoflagellar hook-length control prote... 31 8.1
UniRef50_A0UIV6 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_Q4XBF4 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
>UniRef50_O97159 Cluster: Chromodomain-helicase-DNA-binding protein
Mi-2 homolog; n=9; Coelomata|Rep:
Chromodomain-helicase-DNA-binding protein Mi-2 homolog -
Drosophila melanogaster (Fruit fly)
Length = 1982
Score = 115 bits (276), Expect = 5e-25
Identities = 52/65 (80%), Positives = 59/65 (90%)
Frame = -1
Query: 254 RSKEGIEQKESWANEYLSSFKVASYSTKEGDGEEEVDTEIIKQEAENTDPAYWIKLLRHH 75
R+ GIE+KESWANEYLSSFKVASY+TKE + EEE TEIIKQ+AEN+DPAYW+KLLRHH
Sbjct: 1251 RTNRGIEEKESWANEYLSSFKVASYATKEEEEEEE--TEIIKQDAENSDPAYWVKLLRHH 1308
Query: 74 YEQHQ 60
YEQHQ
Sbjct: 1309 YEQHQ 1313
Score = 86.2 bits (204), Expect = 3e-16
Identities = 45/61 (73%), Positives = 46/61 (75%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILRXXXXXXXXXXXXXXEAIHYDDRAVGELL 257
KRKMMLTHLVVRPGMGGKGANFTKQELDDILR EAIHYDD+AV ELL
Sbjct: 1191 KRKMMLTHLVVRPGMGGKGANFTKQELDDILR-FGTEDLFKEDDKEEAIHYDDKAVAELL 1249
Query: 256 D 254
D
Sbjct: 1250 D 1250
>UniRef50_Q22516 Cluster: Chromodomain-helicase-DNA-binding protein 3
homolog; n=3; Caenorhabditis|Rep:
Chromodomain-helicase-DNA-binding protein 3 homolog -
Caenorhabditis elegans
Length = 1787
Score = 85.8 bits (203), Expect = 4e-16
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = -1
Query: 236 EQKESWANEYLSSFKVASYSTKEGDG--EEEVDTEIIKQEAENTDPAYWIKLLRHHYEQH 63
E+KE W NEYLSSFKVA+Y+TKE D ++E +TE+IK+ E DP YW KLL+HHYEQ
Sbjct: 1166 EKKEHWTNEYLSSFKVATYNTKEADDADDDEDETEVIKEGTEEQDPNYWEKLLKHHYEQD 1225
Query: 62 Q 60
Q
Sbjct: 1226 Q 1226
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/33 (63%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGK-GANFTKQELDDILR 341
K+KM+LTHLVVR G+G K G + +K ELDD+LR
Sbjct: 1079 KKKMLLTHLVVRAGLGAKDGKSMSKTELDDVLR 1111
>UniRef50_Q8TDI0 Cluster: Chromodomain-helicase-DNA-binding protein 5;
n=30; Deuterostomia|Rep:
Chromodomain-helicase-DNA-binding protein 5 - Homo
sapiens (Human)
Length = 1954
Score = 82.2 bits (194), Expect = 4e-15
Identities = 39/52 (75%), Positives = 41/52 (78%)
Frame = -1
Query: 215 NEYLSSFKVASYSTKEGDGEEEVDTEIIKQEAENTDPAYWIKLLRHHYEQHQ 60
NEYLSSFKVA Y +E DG EEV+ EIIKQE EN DP YW KLLRHHYEQ Q
Sbjct: 1282 NEYLSSFKVAQYVVREEDGVEEVEREIIKQE-ENVDPDYWEKLLRHHYEQQQ 1332
Score = 57.2 bits (132), Expect = 1e-07
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILR 341
KRKMMLTHLVVRPG+G K + TKQELDDIL+
Sbjct: 1163 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILK 1194
>UniRef50_Q12873 Cluster: Chromodomain-helicase-DNA-binding protein 3;
n=124; Eumetazoa|Rep: Chromodomain-helicase-DNA-binding
protein 3 - Homo sapiens (Human)
Length = 2000
Score = 78.2 bits (184), Expect = 7e-14
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -1
Query: 215 NEYLSSFKVASYSTKEGDGEEEVDTEIIKQEAENTDPAYWIKLLRHHYEQHQ 60
NEYLSSFKVA Y +E D EE++ EIIKQE EN DP YW KLLRHHYEQ Q
Sbjct: 1280 NEYLSSFKVAQYVVREEDKIEEIEREIIKQE-ENVDPDYWEKLLRHHYEQQQ 1330
Score = 60.1 bits (139), Expect = 2e-08
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILR------XXXXXXXXXXXXXXEAIHYDDR 275
KRKMMLTHLVVRPG+G K + +KQELDDIL+ IHYD+
Sbjct: 1199 KRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNE 1258
Query: 274 AVGELLD 254
A+ LLD
Sbjct: 1259 AIARLLD 1265
>UniRef50_Q4SNF1 Cluster: Chromosome 8 SCAF14543, whole genome shotgun
sequence; n=2; Euteleostomi|Rep: Chromosome 8 SCAF14543,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1989
Score = 76.6 bits (180), Expect = 2e-13
Identities = 38/53 (71%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -1
Query: 215 NEYLSSFKVASYSTK-EGDGEEEVDTEIIKQEAENTDPAYWIKLLRHHYEQHQ 60
NEYLSSFKVA Y K E D EEEV+ E+IKQE E+ DP YW KLLRHHYEQ Q
Sbjct: 1290 NEYLSSFKVAQYVVKDEDDEEEEVEREVIKQE-ESVDPDYWEKLLRHHYEQQQ 1341
Score = 58.8 bits (136), Expect = 5e-08
Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILRXXXXXXXXXXXXXXE-------AIHYDD 278
K+KMMLTHLVVRPG+G K + +KQELDDIL+ + IHYDD
Sbjct: 1208 KKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEVGDGDNKEDDSSVIHYDD 1267
Query: 277 RAVGELLD 254
A+ LLD
Sbjct: 1268 HAIDRLLD 1275
>UniRef50_Q4T5L7 Cluster: Chromosome undetermined SCAF9199, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF9199, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1369
Score = 75.8 bits (178), Expect = 4e-13
Identities = 39/53 (73%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -1
Query: 215 NEYLSSFKVASYSTK-EGDGEEEVDTEIIKQEAENTDPAYWIKLLRHHYEQHQ 60
NEYLSSFKVA Y K E D EEEV EIIKQE E+ DP YW KLLRHHYEQ Q
Sbjct: 1109 NEYLSSFKVAQYVVKDEEDEEEEVQREIIKQE-ESVDPDYWEKLLRHHYEQQQ 1160
Score = 61.7 bits (143), Expect = 7e-09
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILR----XXXXXXXXXXXXXXEAIHYDDRAV 269
K+KMMLTHLVVRPG+G K + +KQELDDIL+ IHYDD+A+
Sbjct: 1030 KKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEALFKDEGENKEEDSSIIHYDDKAI 1089
Query: 268 GELLD 254
LLD
Sbjct: 1090 DRLLD 1094
>UniRef50_Q14839-2 Cluster: Isoform 2 of Q14839 ; n=19;
Euteleostomi|Rep: Isoform 2 of Q14839 - Homo sapiens
(Human)
Length = 1940
Score = 73.3 bits (172), Expect = 2e-12
Identities = 40/68 (58%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Frame = -1
Query: 254 RSKEGIEQKE-SWANEYLSSFKVASYSTKEGD--GEEEVDTEIIKQEAENTDPAYWIKLL 84
R+++ E E NEYLSSFKVA Y +E + EEEV+ EIIKQE E+ DP YW KLL
Sbjct: 1260 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQE-ESVDPDYWEKLL 1318
Query: 83 RHHYEQHQ 60
RHHYEQ Q
Sbjct: 1319 RHHYEQQQ 1326
Score = 57.6 bits (133), Expect = 1e-07
Identities = 36/86 (41%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILR----------XXXXXXXXXXXXXXEAIH 287
K+KMMLTHLVVRPG+G K + +KQELDDIL+ IH
Sbjct: 1189 KKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIH 1248
Query: 286 YDDRAVGELLDGLRKE*NRKNLGLMN 209
YDD+A+ LLD + E L MN
Sbjct: 1249 YDDKAIERLLDRNQDETEDTELQGMN 1274
>UniRef50_A2YA18 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 1364
Score = 43.6 bits (98), Expect = 0.002
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILR---XXXXXXXXXXXXXXEAIHYDDRAVG 266
K+KM+L HLVV G KG N ++ELDDI+R IHYDD A+
Sbjct: 750 KKKMVLEHLVV--GRLTKGTNIVQEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAID 807
Query: 265 ELLD 254
LLD
Sbjct: 808 RLLD 811
Score = 35.9 bits (79), Expect = 0.38
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Frame = -1
Query: 248 KEGIEQKESWANEYLSSFKVASYS----TKEGDGEEEVDTEIIKQEAENTDPA-YWIKLL 84
+E +E +E +E+L FKVA++ K +EE + + EA N+D A +W KLL
Sbjct: 818 EEPVEDEEE--DEFLKGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRANFWDKLL 875
Query: 83 RHHYEQHQVE 54
+ Y+ +VE
Sbjct: 876 KDRYDVQKVE 885
>UniRef50_Q9S775 Cluster: CHD3-type chromatin-remodeling factor
PICKLE; n=9; Magnoliophyta|Rep: CHD3-type
chromatin-remodeling factor PICKLE - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1384
Score = 37.1 bits (82), Expect = 0.16
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILRXXXXXXXXXXXXXXEA---IHYDDRAVG 266
K+KM+L HLVV K N ++ELDDI+R IHYDD A+
Sbjct: 734 KKKMVLEHLVVGKL---KTQNINQEELDDIIRYGSKELFASEDDEAGKSGKIHYDDAAID 790
Query: 265 ELLD 254
+LLD
Sbjct: 791 KLLD 794
Score = 33.9 bits (74), Expect = 1.5
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = -1
Query: 245 EGIEQKESWANEYLSSFKVASYSTKEGDGEEEVDTEII----KQEAENTDPA-YWIKLLR 81
E + + N +L +FKVA++ + + ++ + + K A N+D A YW +LL+
Sbjct: 801 EEVSVDDEEENGFLKAFKVANFEYIDENEAAALEAQRVAAESKSSAGNSDRASYWEELLK 860
Query: 80 HHYEQHQVE 54
+E HQ E
Sbjct: 861 DKFELHQAE 869
>UniRef50_Q5JGD4 Cluster: Putative uncharacterized protein; n=1;
Thermococcus kodakarensis KOD1|Rep: Putative
uncharacterized protein - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 277
Score = 35.5 bits (78), Expect = 0.50
Identities = 24/53 (45%), Positives = 29/53 (54%)
Frame = +3
Query: 45 QRGFYLMLFVVMPEKFDPVRRISILCFLFYNFCIDFLFTIAFLSGITSNFERA 203
Q+ Y M FV PEK D V +S L +FY D +A +S ITSNF RA
Sbjct: 146 QKAAYAMKFVKDPEKLDVV--LSYLAEVFYERG-DIEKALAIISHITSNFHRA 195
>UniRef50_UPI0000F1E921 Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 469
Score = 35.1 bits (77), Expect = 0.66
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -1
Query: 257 RRSKEGIEQKESWANEYLSSFKVASYSTKEGDGEEEVDTEIIKQEAENTD 108
RRS+ +KE E + KV S KE + EE++DTE+IK EAE D
Sbjct: 45 RRSQNKSGRKEDTMKEEVE-MKVMEESIKEAEKEEKMDTEVIK-EAEKED 92
>UniRef50_Q73QQ8 Cluster: ABC transporter, ATP-binding/permease
protein; n=1; Treponema denticola|Rep: ABC transporter,
ATP-binding/permease protein - Treponema denticola
Length = 522
Score = 35.1 bits (77), Expect = 0.66
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 96 PVRRISILCFLFYNFCIDFLFTIAFLSGITSNFERAKIFISPRFFLFYSFLRP 254
P ++S FL FC DF+F I +S +T E+ FIS F Y +P
Sbjct: 47 PNIKLSDYLFLITFFCCDFIFCILSISVLTRLLEKIYYFISDTIFYKYQTEKP 99
>UniRef50_Q6GP10 Cluster: MGC80752 protein; n=1; Xenopus laevis|Rep:
MGC80752 protein - Xenopus laevis (African clawed frog)
Length = 463
Score = 33.5 bits (73), Expect = 2.0
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = -1
Query: 245 EGIEQKESWANEYLSSFKVASYSTKEGDGEEEVDTEIIKQEAENTDPAYWIKLLRHHYEQ 66
E + NE L+ +AS S E + E + + I+K++ DP L H +
Sbjct: 323 ENVPDSAPEMNESLTDIVMASTSVDEPEPEPDNEAAIVKEQEIIKDPVEMPGNLESHQSE 382
Query: 65 HQVESS 48
H VE S
Sbjct: 383 HSVEQS 388
>UniRef50_Q54GX4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1283
Score = 33.5 bits (73), Expect = 2.0
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -1
Query: 260 TRRSKEGIEQKESWANEYLSSFKVASYSTKEGDGEEEVDTEI-IKQEAENTDPAYWIKLL 84
T ++E E +E+ E L + T+E +G EEV+TEI ++ ++DP Y +K +
Sbjct: 330 TEETEETEETEETEETEELEETEETE-ETEETEGTEEVETEIYVETSPTSSDPYYTLKRV 388
Query: 83 RHHYE 69
+ Y+
Sbjct: 389 KVSYK 393
>UniRef50_Q5A659 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 126
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 93 DPVRRISILCFLFYNFCIDFLFTIAFLSGITSNFERAKIFISPRFFLFYSFL 248
+PVR +S L FL + + FLF ++FLS S F F F F+SFL
Sbjct: 46 EPVRILSFLSFLSFLSFLSFLFFLSFLS-FLSFFSFFFFFSFFSFLSFFSFL 96
>UniRef50_UPI0000499350 Cluster: hypothetical protein 209.t00004;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 209.t00004 - Entamoeba histolytica HM-1:IMSS
Length = 171
Score = 32.3 bits (70), Expect = 4.7
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 75 VMPEKFDPVRRISILCFLFYNFCIDFLFTIAFLSGITSNFERAKIFISPRFFLFY 239
+ P K++P + + L +YN+ I+ + I GITSN +K+FI +Y
Sbjct: 90 IEPSKYEPNKNNNDLIHTYYNYDINNVLNIQHAYGITSN---SKVFIYESIINYY 141
>UniRef50_UPI000034F14B Cluster: chromatin remodeling factor,
putative; n=1; Arabidopsis thaliana|Rep: chromatin
remodeling factor, putative - Arabidopsis thaliana
Length = 1202
Score = 32.3 bits (70), Expect = 4.7
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILRXXXXXXXXXXXXXXEA---IHYDDRAVG 266
K KM+L HLVV GK + + ELDDI++ IHYDD A+
Sbjct: 663 KNKMLLEHLVV-----GK-QHLCQDELDDIIKYGSKELFSEENDEAGRSGKIHYDDAAIE 716
Query: 265 ELLD 254
+LLD
Sbjct: 717 QLLD 720
>UniRef50_Q9SZ57 Cluster: Putative uncharacterized protein
AT4g31900; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein AT4g31900 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1067
Score = 32.3 bits (70), Expect = 4.7
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 436 KRKMMLTHLVVRPGMGGKGANFTKQELDDILRXXXXXXXXXXXXXXEA---IHYDDRAVG 266
K KM+L HLVV GK + + ELDDI++ IHYDD A+
Sbjct: 553 KNKMLLEHLVV-----GK-QHLCQDELDDIIKYGSKELFSEENDEAGRSGKIHYDDAAIE 606
Query: 265 ELLD 254
+LLD
Sbjct: 607 QLLD 610
>UniRef50_A7BZQ0 Cluster: Membrane protein; n=1; Beggiatoa sp.
PS|Rep: Membrane protein - Beggiatoa sp. PS
Length = 110
Score = 31.9 bits (69), Expect = 6.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 135 NFCIDFLFTIAFLS-GITSNFERAKIFISPRFFLFYSFL 248
NFC+D+LF I+ ++ I KI I +FLFY L
Sbjct: 17 NFCLDYLFWISLMAKNILLIIPGKKINIRKNYFLFYKLL 55
>UniRef50_Q5S4W8 Cluster: Putative uncharacterized protein; n=3;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 310
Score = 31.9 bits (69), Expect = 6.2
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -1
Query: 248 KEGIEQKESWANEYLS-SFKVASYSTKEGDGEEEVDTEIIKQEAENTDPAYWIKLLR 81
K+G+ + + W N+ L V+S S K+ D + VD E+++QE + + +K+ R
Sbjct: 224 KDGVRELDQWCNKLLKYGEAVSSGSVKQDDSPKAVD-EVVQQEEQPKECKEGVKVNR 279
>UniRef50_Q2SF32 Cluster: Response regulator containing a CheY-like
receiver domain and an HD- GYP domain; n=1; Hahella
chejuensis KCTC 2396|Rep: Response regulator containing
a CheY-like receiver domain and an HD- GYP domain -
Hahella chejuensis (strain KCTC 2396)
Length = 447
Score = 31.5 bits (68), Expect = 8.1
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = -2
Query: 289 HYDDRAVGELLDGLRKE*NRKNLGLMNILALSKLLVIPLRKAMVKRKSIQKL*NRKQRIL 110
H D VG L+ G+R + KN IL ++K V+ K + K S++KL NRK +
Sbjct: 387 HEDKLGVGALVPGMRLSRDLKNTN--GILLIAKGHVL-TEKIIEKMLSLEKLENRKLSVF 443
Query: 109 ILR 101
+++
Sbjct: 444 VMK 446
>UniRef50_Q04UH0 Cluster: Endoflagellar hook-length control protein;
n=4; Leptospira|Rep: Endoflagellar hook-length control
protein - Leptospira borgpetersenii serovar Hardjo-bovis
(strain JB197)
Length = 518
Score = 31.5 bits (68), Expect = 8.1
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -1
Query: 260 TRRSKEGIEQKESWANEYLSSFKVASYSTKEGDGEEEVDTEIIKQEAENT 111
T SKE I E W + K+ SY+ + G+EE+ T I+ Q +EN+
Sbjct: 260 TEVSKELILDLEKWKID--KDKKMDSYANLKSSGKEEIKTAILSQFSENS 307
>UniRef50_A0UIV6 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 286
Score = 31.5 bits (68), Expect = 8.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 248 KEGIEQKESWANEYLSSFKVASYSTKEGDGEEEVDTEIIKQEAENTDP 105
+ G+E A++ +F + + TK G +VDT + K +AE T+P
Sbjct: 186 RHGVEIDHMSAHQRAKAFPLFAAWTKAGVTRRQVDTAVAKAQAEATEP 233
>UniRef50_Q4XBF4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 59
Score = 31.5 bits (68), Expect = 8.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 102 RRISILCFLFYNFCIDFLFTIAFLSGITSN 191
RRI I ++FYNFC++ F I ++ I ++
Sbjct: 2 RRIDIYYYIFYNFCLNCEFNILHINAIPTH 31
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,620,707
Number of Sequences: 1657284
Number of extensions: 5424517
Number of successful extensions: 19514
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 18963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19487
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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