Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1290X
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   0.96 
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   2.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   3.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   3.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   3.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   9.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   9.0  

>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 81  PEKFDPVRRISILCFLFYNF 140
           PEKFDP R +   C   +NF
Sbjct: 103 PEKFDPDRFLPENCLKRHNF 122


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = -1

Query: 215 NEYLSSFKVASYSTKEGDGEEEVDTEIIKQEAENTDPAYWIK 90
           NE+ +      + T  G  +         Q  +N DP+YW K
Sbjct: 101 NEFRTKILAQVHGTNNGTNKNMRRLSTTTQN-KNDDPSYWEK 141


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 348 ISSNSCLVKLAPFPPMPGR 404
           +S N C VK+   P  PG+
Sbjct: 192 LSFNDCFVKVPRTPDKPGK 210


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 333 VPNRRISSNSCLVKLAPFPPMPGRTTKCVNI 425
           V NRR S NSC  K+      P  +    N+
Sbjct: 190 VENRRNSPNSCEKKIGLSKISPKESQDAANV 220


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 333 VPNRRISSNSCLVKLAPFPPMPGRTTKCVNI 425
           V NRR S NSC  K+      P  +    N+
Sbjct: 138 VENRRNSPNSCEKKIGLSKISPKESQDAANV 168


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 333 VPNRRISSNSCLVKLAPFPPMPGRTTKCVNI 425
           V NRR S NSC  K+      P  +    N+
Sbjct: 321 VENRRNSPNSCEKKIGLSKISPKESQDAANV 351


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/37 (18%), Positives = 16/37 (43%)
 Frame = +3

Query: 126 LFYNFCIDFLFTIAFLSGITSNFERAKIFISPRFFLF 236
           ++Y +C+   F +  L  + S +    +     F +F
Sbjct: 56  IYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIF 92


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 398 RSHHQMR*HHF 430
           RS+HQ + HH+
Sbjct: 790 RSYHQQQSHHY 800


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,052
Number of Sequences: 336
Number of extensions: 1366
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)