Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1290X
         (437 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   2.1  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   2.1  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   4.8  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 87  KFDPVRRISILCFLFYNFCIDFLFTIA 167
           +FDP R +  +C ++ N C    F +A
Sbjct: 891 EFDPARTVLEICRIYVNLCECDAFCLA 917



 Score = 23.4 bits (48), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 223 DSFCSIPSLDRRVIHPQLYRHNE 291
           D+FC   S D R   PQL+ + E
Sbjct: 912 DAFCLAVSQDGRSYSPQLFEYAE 934



 Score = 22.6 bits (46), Expect = 6.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 347 NIIQLLLSEVSSLSAHA 397
           NI+QLL SE  S+  H+
Sbjct: 841 NILQLLTSETKSIFCHS 857


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 363 CLVKLAPFPPMPGRT-TKCVNII 428
           C +  +PFPP+ G+T T+ ++II
Sbjct: 320 CKMARSPFPPVAGKTSTEVLDII 342


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -1

Query: 185 SYSTKEGDGEEEVDTEIIKQEAENTDPAYWIKLL--RHHYEQHQVESSLFSVCATL 24
           S   + G     + +E  + +    D +Y  KL   +H YE H++ +  F +  T+
Sbjct: 330 SQPARTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTI 385


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,872
Number of Sequences: 2352
Number of extensions: 5506
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)