Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1287
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 153 1e-37
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 153 1e-37
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 153 1e-37
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 153 1e-37
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 153 1e-37
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 153 1e-37
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 153 1e-37
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 147 8e-36
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 146 1e-35
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 88 7e-18
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 78 5e-15
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 76 3e-14
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 52 3e-07
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 52 5e-07
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 30 1.4
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 30 1.4
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 30 1.4
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 30 1.4
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 3.3
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 28 7.5
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 28 7.5
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 7.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 153 bits (371), Expect = 1e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 140 bits (338), Expect = 1e-33
Identities = 61/67 (91%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 299 VLSGGTT 305
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 153 bits (371), Expect = 1e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 140 bits (340), Expect = 7e-34
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 299 VLSGGTT 305
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 153 bits (371), Expect = 1e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 140 bits (338), Expect = 1e-33
Identities = 61/67 (91%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 299 VLSGGTT 305
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 153 bits (371), Expect = 1e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 140 bits (340), Expect = 7e-34
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 299 VLSGGTT 305
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 153 bits (371), Expect = 1e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 140 bits (340), Expect = 7e-34
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 299 VLSGGTT 305
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 153 bits (371), Expect = 1e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 140 bits (338), Expect = 1e-33
Identities = 61/67 (91%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 299 VLSGGTT 305
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 153 bits (371), Expect = 1e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 262 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 321
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 322 SGPSIVHRKCF 332
Score = 140 bits (340), Expect = 7e-34
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 195 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 254
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 255 VLSGGTT 261
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 153 bits (371), Expect = 1e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 292 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 351
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 352 SGPSIVHRKCF 362
Score = 140 bits (340), Expect = 7e-34
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 225 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 284
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 285 VLSGGTT 291
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 153 bits (371), Expect = 1e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 140 bits (340), Expect = 7e-34
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 299 VLSGGTT 305
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 147 bits (356), Expect = 8e-36
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
MYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
Score = 140 bits (338), Expect = 1e-33
Identities = 61/67 (91%), Positives = 66/67 (98%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 299 VLSGGTT 305
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 146 bits (355), Expect = 1e-35
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 305 MFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 327 SGPSIVHRKCF 295
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
Score = 135 bits (326), Expect = 3e-32
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
KSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANT 297
Query: 527 VLSGGTT 507
VLSGGT+
Sbjct: 298 VLSGGTS 304
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 87.8 bits (208), Expect = 7e-18
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = -3
Query: 498 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDE
Sbjct: 366 GFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDE 425
Query: 327 SGPSIVHRKC 298
SG SIV +KC
Sbjct: 426 SGKSIVEKKC 435
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = -1
Query: 701 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 537
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 536 ANTVLSGGTTCTL 498
+N ++GG + L
Sbjct: 353 SNVTVTGGNSLIL 365
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 78.2 bits (184), Expect = 5e-15
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = -1
Query: 704 SYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTV 525
SY LPD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N V
Sbjct: 238 SYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIV 297
Query: 524 LSGGTT 507
LSGGTT
Sbjct: 298 LSGGTT 303
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++
Sbjct: 304 LFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYED 363
Query: 327 SGPSIVHRKCF 295
G S +H++ F
Sbjct: 364 MGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = -1
Query: 707 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
+ Y LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y +
Sbjct: 242 QQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHI 301
Query: 527 VLSGGTT 507
VLSGGTT
Sbjct: 302 VLSGGTT 308
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 13/75 (17%)
Frame = -3
Query: 507 MYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--ST 367
MYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 309 MYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDR 368
Query: 366 FQQMWISKQEYDESG 322
Q W+SK+EY+E G
Sbjct: 369 DQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = -1
Query: 671 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 507
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG +
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGAS 482
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/57 (33%), Positives = 38/57 (66%)
Frame = -3
Query: 507 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 337
+ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 483 LMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = -1
Query: 677 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTC 504
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++C
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSC 320
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3
Query: 504 YPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
+PG +R+++E+ ++ P+ + + + P+ W G L + S WI+++++
Sbjct: 321 FPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHS--WHCGQELLTASKVP--WINRKDW 376
Query: 333 DESGPSIVHRKCF*T 289
DE G S+ F T
Sbjct: 377 DERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = -1
Query: 677 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTC 504
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++C
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSC 320
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3
Query: 504 YPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
+PG +R+++E+ ++ P+ + + + P+ W G L + S WI+++++
Sbjct: 321 FPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHS--WHCGQELLTASKVP--WINRKDW 376
Query: 333 DESGPSIVHRKCF*T 289
DE G S+ F T
Sbjct: 377 DERGDSLEFSNFFQT 391
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = -1
Query: 677 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 507
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+T
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGST 333
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -3
Query: 462 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 313
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 575 IMKCDVDIRKDLYANTVLSGGTT 507
+ KC +D+RK L+ N +L+GG +
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVS 220
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 400 PYGVLPLWRSNDLYLHCRWGESCD 471
P VLPL NDL +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 400 PYGVLPLWRSNDLYLHCRWGESCD 471
P VLPL NDL +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 400 PYGVLPLWRSNDLYLHCRWGESCD 471
P VLPL NDL +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = -1
Query: 404 YGSVDRSSPPSLPSNKCG-SRNKSTTSLAPPLY-TGSASKRTARRCLQQPAAAAQFRLVI 231
Y + +RSSPP ++ C S + +T PL+ + S SK +A + P+ ++ F +
Sbjct: 1131 YSADERSSPPLAGNSTCSVSTSSDSTPDECPLHGSRSFSKISALKIQSSPSPSSSFSRFL 1190
Query: 230 SVNLIVRKILL 198
S+ + LL
Sbjct: 1191 SLRRTAKPSLL 1201
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 648 PRGSLPTLVLGYGSLRHPRDNI*LHHEVRRGHP 550
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 648 PRGSLPTLVLGYGSLRHPRDNI*LHHEVRRGHP 550
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 420 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 259
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,566,718
Number of Sequences: 27780
Number of extensions: 334886
Number of successful extensions: 977
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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