Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1285X
         (447 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.43 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   5.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   5.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   5.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   5.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   7.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.0  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 114 IVHLLVFFLYKFIT*IVIMGGCATKENKENKPKEGSDGKAATMVDAAPSRNWRLVSAS 287
           I+HL VF +Y  ++ I+I+ GC    +   K  E          + AP R   L  AS
Sbjct: 212 IIHLSVF-VYTLVSVILIIMGCDVVASNSRKTAEMCYKLQGFYPEEAPQRKELLRFAS 268


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 435 IPTPESKFSTPDWMQSRRLDP 373
           +P P+    T  WMQ +R  P
Sbjct: 187 VPQPQPVLPTYKWMQVKRNVP 207


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 111 VIVHLLVFFLYKF 149
           V VHL++ FLY F
Sbjct: 134 VAVHLVLAFLYSF 146


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 36  HFDKIAFHHCI*YLPF 83
           HF K  FH+   Y+P+
Sbjct: 181 HFFKKQFHYIFTYMPY 196


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 435 IPTPESKFSTPDWMQSRRLDP 373
           +P P+    T  WMQ +R  P
Sbjct: 187 VPQPQPVLPTYKWMQVKRNVP 207


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 435 IPTPESKFSTPDWMQSRRLDP 373
           +P P+    T  WMQ +R  P
Sbjct: 187 VPQPQPVLPTYKWMQVKRNVP 207


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
          protein protein.
          Length = 242

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 20 GAPIHSFRQNSIPSLHLVSS 79
          GAP  S  QN  PS+ + SS
Sbjct: 11 GAPYPSTDQNPYPSIGVESS 30


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 380 SLLDCIQSGVENLDSGVGIYA 442
           S L+ + SG ENLD  + IY+
Sbjct: 199 SKLNHLLSGTENLDLVLPIYS 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,689
Number of Sequences: 336
Number of extensions: 2037
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)