Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1285X
(447 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 69 2e-12
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 69 2e-12
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.047
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.33
SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11) 30 1.0
SB_33019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_31879| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4) 29 1.3
SB_30282| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_25245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4) 29 1.3
SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027) 29 1.3
SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10) 29 1.3
SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 29 1.3
SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15) 29 2.3
SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17) 28 3.1
SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 28 4.0
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 28 4.0
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 27 7.1
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_16879| Best HMM Match : Stig1 (HMM E-Value=1) 27 9.3
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 248 RRTLEKLEAGFSK-LQGSDSKSLLKKYLTREVXDSL*NKKTSFGSSLLDCIQSGVENLDS 424
R +E+ F + L+ + KSLLKKYLT +V +SL KKTS G+ L DCI SGV NLDS
Sbjct: 616 RAAIEEAHLKFPEDLKKPEVKSLLKKYLTEDVFNSLKEKKTSRGAGLYDCINSGVVNLDS 675
Query: 425 GVGIYA 442
G G+YA
Sbjct: 676 GTGVYA 681
Score = 67.3 bits (157), Expect = 5e-12
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +2
Query: 287 LQGSDSKSLLKKYLTREVXDSL*NKKTSFGSSLLDCIQSGVENLDSGVGIYA 442
L+ + KSL+KKYLT E+ + L +KKT G +L DCI SGVENLDSG GIYA
Sbjct: 198 LKKPEVKSLMKKYLTEEMFNELKDKKTELGVTLSDCINSGVENLDSGTGIYA 249
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 68.5 bits (160), Expect = 2e-12
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +2
Query: 221 GRKSRNNGRRRTLEKLEAGFSK-LQGSDSKSLLKKYLTREVXDSL*NKKTSFGSSLLDCI 397
G KS R +EK + F + L + KSLLKKYLT E+ +SL +KKT+ G SL DCI
Sbjct: 335 GVKSLLEIERAAIEKQRSVFPEALNKEECKSLLKKYLTAEMFNSLKDKKTAKGISLYDCI 394
Query: 398 QSGVENLDSGVGIYA 442
SGV NLDS G+YA
Sbjct: 395 NSGVVNLDSSCGVYA 409
Score = 31.5 bits (68), Expect = 0.33
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +2
Query: 305 KSLLKKYLTREVXDSL*NKKTSFGSSLLDCIQSGVENLDSGVGIY 439
K LLKKYLT +V D L KKT G G ++D G Y
Sbjct: 35 KCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGGGGGDVDDDDGEY 79
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 34.3 bits (75), Expect = 0.047
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +2
Query: 227 KSRNNGRRRTLEKLEAGFS--KLQGSD-SKSLLKKYLTREVXDSL*NKKTSFGSSLLDCI 397
K+R ++ E+ +A + ++ G + ++ + K+LTR+V + L N KT G +L I
Sbjct: 735 KAREEAIKKEAERQKASSTLRRVPGPEQAQHYMAKFLTRDVYNKLCNLKTPSGFTLDGVI 794
Query: 398 QSGVEN 415
Q+GV+N
Sbjct: 795 QTGVDN 800
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 314 LKKYLTREVXDSL*NKKTSFGSSLLDCIQSGVEN 415
+ K LT+E+ SL +K T G +L D IQ+GV+N
Sbjct: 2323 MAKVLTKEIYRSLRDKSTKNGFTLDDIIQTGVDN 2356
>SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 31.5 bits (68), Expect = 0.33
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +2
Query: 305 KSLLKKYLTREVXDSL*NKKTSFGSSLLDCIQSGVENLDSGVGIY 439
K LLKKYLT +V D L KKT G G ++D G Y
Sbjct: 174 KCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGGGGGDVDDDDGEY 218
>SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11)
Length = 809
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 393 QSRRLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
Q R D N V++ YR L F DL+ PWS+L
Sbjct: 65 QDRAADKNHVYISYR-DCKKLDEEAFPEDLDEAPWSVL 101
>SB_33019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 877
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -3
Query: 205 LFSLFSFVAQPPIITIYVINLYKKNTNKCTI 113
L+S+ S+++Q TI+++NL+ +T CT+
Sbjct: 742 LYSMVSYLSQVAYHTIHLLNLFYTSTQVCTL 772
>SB_31879| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4)
Length = 200
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 393 QSRRLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
Q R D N V++ YR L F DL+ PWS+L
Sbjct: 145 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 181
>SB_30282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 239 NGR-RRTLEKLEAGFSKLQGSDSKSLLKKY--LTREVXDSL*NKKTSFGSSLLDCIQSGV 409
NGR R T +KLE GF+ + + L K + TR++ D L F +LL+ +++G+
Sbjct: 226 NGRTRETTDKLEKGFNGITRKSTDKLEKGFNGRTRKITDKLEKGFNEF-DALLEALKNGL 284
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 239 NGR-RRTLEKLEAGFSKLQGSDSKSLLKKY--LTREVXDSL 352
NGR R T +KLE GF+ + + L K + TRE D L
Sbjct: 76 NGRTRETTDKLEKGFNGITRKSTDKLEKGFNGRTRETTDKL 116
>SB_25245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 393 QSRRLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
Q R D N V++ YR L F DL+ PWS+L
Sbjct: 101 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 137
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 242 GRRRTLEKLEAGFSKLQGSDSKSLLKKYLTREVXDSL*NKKTSFGSSLLDCIQSGVEN 415
G RR EK A +L+ K+LT + L +K T G +L IQ+GV+N
Sbjct: 39 GIRRAYEKNAAMADYPDLRQHNNLMAKHLTPRLYVKLRDKSTPNGYTLDQAIQTGVDN 96
>SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 893
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 393 QSRRLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
Q R D N V++ YR L F DL+ PWS+L
Sbjct: 337 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 373
>SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4)
Length = 432
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 393 QSRRLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
Q R D N V++ YR L F DL+ PWS+L
Sbjct: 145 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 181
>SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027)
Length = 381
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 393 QSRRLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
Q R D N V++ YR L F DL+ PWS+L
Sbjct: 189 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 225
>SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 393 QSRRLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
Q R D N V++ YR L F DL+ PWS+L
Sbjct: 101 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 137
>SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10)
Length = 734
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 393 QSRRLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
Q R D N V++ YR L F DL+ PWS+L
Sbjct: 605 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 641
>SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 675
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 393 QSRRLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
Q R D N V++ YR L F DL+ PWS+L
Sbjct: 119 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 155
>SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15)
Length = 132
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 308 SLLKKYLTREVXDSL*NKKTSFGSSLLDCIQSGVEN 415
+++ ++LT E+ L ++KTS G +L IQ GV+N
Sbjct: 77 NIMARHLTPEMYVHLCDRKTSNGFTLDQAIQPGVDN 112
>SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17)
Length = 809
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 180 ATKENKENKPKEGSDGKAATMVDAAPSRNWRLVSASSRDPTLSR 311
+TKENKE K KE + ++ + D P + + V+ R LSR
Sbjct: 377 STKENKEKKRKEVTKSRSFSTADEDP-KTAKKVTKRKRSRALSR 419
>SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 384 RLDPNEVFLFYRLSXTSLVRYFFSSDLESDPWSLL 280
R D N V++ YR L F DL+ PWS+L
Sbjct: 370 RTDKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 403
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 176 LCNKRK*RKQTKRGLGRKSRNNGRRRTLEKLEAGFSKLQGSDSKSLLKKYLTRE 337
L K K +++ K+G +K NG K E+ +K + ++KS K LTR+
Sbjct: 12 LPRKEKEKEKDKKGKKKKGEQNGENNDSAKEESKKNKKEAKEAKS--KTTLTRK 63
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 432 PTPESKFSTPDWMQSRRLDPNEVFLFYRLSXTS 334
P P+ KFS P + SR LD E L + L+ S
Sbjct: 5 PKPKEKFSEPVIIASRNLDSVEARLAFNLTTVS 37
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/80 (23%), Positives = 34/80 (42%)
Frame = +3
Query: 186 KENKENKPKEGSDGKAATMVDAAPSRNWRLVSASSRDPTLSRC*RSTLPGKYXTACRTKR 365
KEN++NKP++ T + + +SR +L R +++ T+ +T R
Sbjct: 83 KENQQNKPEDKQQTTPKTSRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTDR 142
Query: 366 PHSDPASLTASNRVSRTWTP 425
S S S + S +P
Sbjct: 143 KKSRNTSPKRSPKTSSKSSP 162
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = -2
Query: 269 PISRGCGVDHCCGFSVRALXXXXXXXXFCCTATHY 165
P + GC DHCC CCT H+
Sbjct: 3255 PETTGCTRDHCCIRDRGGTGDHCCTRDRCCTRDHF 3289
>SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 26.6 bits (56), Expect = 9.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 69 KCNDGMLFCRNECIGA 22
KC+DG + C N+C+ A
Sbjct: 58 KCDDGRICCNNQCVFA 73
>SB_16879| Best HMM Match : Stig1 (HMM E-Value=1)
Length = 232
Score = 26.6 bits (56), Expect = 9.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 69 KCNDGMLFCRNECIGA 22
KC+DG + C N+C+ A
Sbjct: 58 KCDDGRICCNNQCVFA 73
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,615,377
Number of Sequences: 59808
Number of extensions: 264251
Number of successful extensions: 856
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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