Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1284
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.00 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 280  VPTTIKPDACNLVIHFEEPYNIIGSLISPQDDW 182
            +P+ I PD C  +++     N    +I P D W
Sbjct: 1843 LPSDIDPDLCTHIVYGFAVLNGDQLIIKPHDTW 1875


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 822 ILELISQGGWRIYVVDVYRLSNHFTPG 742
           I+EL  +GGW++ V D  + + H   G
Sbjct: 302 IVELQKEGGWKV-VWDDTQKNTHMYKG 327


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 481 KRIMLFHFGLQYKCLGTIKEILVIYIPK*NRYFQH*TLNST 359
           K++ + H    +  LGT KE LVI +P   R F   TL++T
Sbjct: 306 KQLNVEHAANLWVKLGTPKEKLVIGMPTYGRTF---TLSNT 343


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 467 ISFWPAV*MFRNNQGNTCNLHT*IKQIFPTLNSKFHLHLM 348
           ++ +P    F N   +  NLH  + ++    NS + LHL+
Sbjct: 217 VTRFPTELTFCNKIKHLVNLHKNLVKVAKDHNSLYSLHLL 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,708
Number of Sequences: 336
Number of extensions: 4465
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)