Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1284
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.2  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   8.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 259 DACNLVIHFEEPYNIIGSLISP 194
           D+ N  +   EPYN  G+++SP
Sbjct: 883 DSRNPALALAEPYNQRGTVVSP 904


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 259 DACNLVIHFEEPYNIIGSLISP 194
           D+ N  +   EPYN  G+++SP
Sbjct: 921 DSRNPALALAEPYNQRGTVVSP 942


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 483 LKESCYFILACSINV 439
           LKE  Y I+ CS+N+
Sbjct: 144 LKEMFYLIIECSLNL 158


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 63  TRSNKIN*FIRFYRQTHCLHNLDRP 137
           T++N +N ++RF   T C+     P
Sbjct: 53  TKNNLLNAYVRFKLVTDCIFVTSEP 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,427
Number of Sequences: 438
Number of extensions: 5002
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)