Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1283
(795 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7F08 Cluster: PREDICTED: similar to Laminin A ... 49 1e-04
UniRef50_UPI00015B61BF Cluster: PREDICTED: similar to laminin A ... 48 3e-04
UniRef50_Q00174 Cluster: Laminin subunit alpha precursor; n=7; D... 46 0.001
UniRef50_UPI00006A04BD Cluster: Laminin subunit alpha-1 precurso... 39 0.17
UniRef50_P25391 Cluster: Laminin subunit alpha-1 precursor; n=34... 37 0.67
UniRef50_Q0PCZ9 Cluster: Type I polyketide synthase; n=2; Strept... 35 2.0
UniRef50_Q80AZ8 Cluster: G5R-like protein; n=5; Parapoxvirus|Rep... 35 2.7
UniRef50_Q45H72 Cluster: Laminin alpha 1; n=9; Euteleostomi|Rep:... 34 3.6
UniRef50_Q381I5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_UPI0000DC20C6 Cluster: UPI0000DC20C6 related cluster; n... 34 4.7
UniRef50_UPI0000F30F50 Cluster: UPI0000F30F50 related cluster; n... 34 4.7
UniRef50_Q4A2X3 Cluster: Putative membrane protein precursor; n=... 34 4.7
UniRef50_Q2TJF5 Cluster: Laminin alpha 4; n=9; Clupeocephala|Rep... 33 6.2
UniRef50_Q82BJ6 Cluster: Putative protease; n=1; Streptomyces av... 33 6.2
UniRef50_Q16363 Cluster: Laminin subunit alpha-4 precursor; n=40... 33 6.2
UniRef50_Q0GLE1 Cluster: Dof11; n=4; core eudicotyledons|Rep: Do... 33 8.3
>UniRef50_UPI0000DB7F08 Cluster: PREDICTED: similar to Laminin A
CG10236-PA, partial; n=2; Apis mellifera|Rep: PREDICTED:
similar to Laminin A CG10236-PA, partial - Apis mellifera
Length = 2704
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = -2
Query: 761 RWSTLQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKS 609
R +TL+ + P+ + ++TST +S YFRT +GF+LYLGN + L R+K+
Sbjct: 2504 RNTTLELKNPENLPLLATSTKISLYFRTNTTNGFLLYLGNEENIKLPRSKT 2554
>UniRef50_UPI00015B61BF Cluster: PREDICTED: similar to laminin A
chain, putative; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to laminin A chain, putative - Nasonia
vitripennis
Length = 3618
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = -2
Query: 755 STLQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKS 609
+TL+ + P+++ +TST +S YFRT+ +GF+LYLGN T R K+
Sbjct: 2677 TTLELKNPESLPGQTTSTKISIYFRTQRANGFLLYLGNENRTNTPRAKT 2725
>UniRef50_Q00174 Cluster: Laminin subunit alpha precursor; n=7;
Diptera|Rep: Laminin subunit alpha precursor - Drosophila
melanogaster (Fruit fly)
Length = 3712
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -2
Query: 749 LQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKSVCLKII 591
L+ + P+ ++T T++S YFRT E GF+LYLGN T + V ++I+
Sbjct: 2683 LELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIV 2735
>UniRef50_UPI00006A04BD Cluster: Laminin subunit alpha-1 precursor
(Laminin A chain).; n=3; Xenopus tropicalis|Rep: Laminin
subunit alpha-1 precursor (Laminin A chain). - Xenopus
tropicalis
Length = 3076
Score = 38.7 bits (86), Expect = 0.17
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = -2
Query: 212 NSTEPRDKLISSQSGPQE----YRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIY 45
N E + K S PQE + FDG GY+ + L + Q+++ FRT++PNGL+
Sbjct: 2283 NYVERKGKCGGCFSSPQEEDNAFHFDGSGYSIVEKT--LRSTATQIIIHFRTFSPNGLLL 2340
Query: 44 LLKAS 30
L ++
Sbjct: 2341 YLASN 2345
>UniRef50_P25391 Cluster: Laminin subunit alpha-1 precursor; n=34;
Euteleostomi|Rep: Laminin subunit alpha-1 precursor -
Homo sapiens (Human)
Length = 3075
Score = 36.7 bits (81), Expect = 0.67
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -2
Query: 182 SSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLL 39
SSQ+ + FDG GY+ + L Q+++ F T++PNGL+ L
Sbjct: 2300 SSQNEDPSFHFDGSGYSVVEKS--LPATVTQIIMLFNTFSPNGLLLYL 2345
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 152 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLLKASVFEA 18
FDG GYA + GY + L FRT + NG++ + + +A
Sbjct: 2895 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA 2939
>UniRef50_Q0PCZ9 Cluster: Type I polyketide synthase; n=2;
Streptomyces halstedii|Rep: Type I polyketide synthase -
Streptomyces halstedii
Length = 5232
Score = 35.1 bits (77), Expect = 2.0
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 362 DDYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKWLPTTAGTKSSLTGNSTEPRDKLI 183
D +V+G +G Y +DI S P D A S D W +G +S +G EP D+L
Sbjct: 1026 DLQVVVGAADGSGYRSIDI--HSRPHTD-ADWSQDDWTHHASGVLTSASGRPAEPSDELA 1082
Query: 182 S-SQSGPQEYRFDGRGYATMAGRGY 111
+ G DG Y +AG G+
Sbjct: 1083 AWPPQGANPVDLDGI-YERLAGAGF 1106
>UniRef50_Q80AZ8 Cluster: G5R-like protein; n=5; Parapoxvirus|Rep:
G5R-like protein - Orf virus
Length = 298
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 24 EDRRLEKVYQAVRSVRAEEEKHLIRLRRQITSASHRGISTAIEPVLLRARLRGDQFIPGF 203
ED++ ++ + +RAE++ L R+R Q++ A+H + + IE L RA GD F
Sbjct: 84 EDKQEDEHAEFAEEIRAEKQLKLQRIRFQLSIANHEVVKSLIESTLARA---GDAVEIVF 140
Query: 204 C 206
C
Sbjct: 141 C 141
>UniRef50_Q45H72 Cluster: Laminin alpha 1; n=9; Euteleostomi|Rep:
Laminin alpha 1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 3075
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = -2
Query: 182 SSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLLKAS 30
S ++ + FDG G++ + L S V++FF+T +PNGL+ L ++
Sbjct: 2303 SPRTEDTSFHFDGSGFSVVEKS--LRSMSTSVVMFFKTLSPNGLLLYLASN 2351
>UniRef50_Q381I5 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1213
Score = 34.3 bits (75), Expect = 3.6
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 81 EKHLIRLRRQITSASHRGISTAIEPVLLRARLRGDQFIPGFCGVTCQ 221
E H++ LRR ++ S G+ TAI LLR RL G+ +PG +T +
Sbjct: 993 ETHVVGLRRLLSVVSVTGLFTAI---LLRFRLGGEALLPGAVPITSE 1036
>UniRef50_UPI0000DC20C6 Cluster: UPI0000DC20C6 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC20C6 UniRef100 entry -
Rattus norvegicus
Length = 220
Score = 33.9 bits (74), Expect = 4.7
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -2
Query: 581 HY*QHNNDLYHITAYNKLITH--S*VPH*I*PALYNTQTHTHFVTRAHHKNTHSHM*RTH 408
H +H + HI + TH S P+ ++T THTH T H TH+H TH
Sbjct: 143 HTHKHTHTQRHINSLIHTYTHRPSHTPNHS-STCHHTHTHTHTHTHTHTHTTHTHT-HTH 200
Query: 407 NTSTQFLIFHT 375
++ HT
Sbjct: 201 TQKYKYTHIHT 211
>UniRef50_UPI0000F30F50 Cluster: UPI0000F30F50 related cluster; n=1;
Bos taurus|Rep: UPI0000F30F50 UniRef100 entry - Bos
Taurus
Length = 303
Score = 33.9 bits (74), Expect = 4.7
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 531 TYNALMSTALNITGTI*HTNSHSLRNTRTS*KHTLTH-VTHSQ 406
T++ S +T T+ HT++H+L +T T HTLTH +TH Q
Sbjct: 262 THSHTHSHTHTLTHTLTHTHTHTLTHTHTH-SHTLTHTLTHKQ 303
>UniRef50_Q4A2X3 Cluster: Putative membrane protein precursor; n=1;
Emiliania huxleyi virus 86|Rep: Putative membrane
protein precursor - Emiliania huxleyi virus 86
Length = 573
Score = 33.9 bits (74), Expect = 4.7
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 145 PSNLYS*GPDCEEINLSLGSVELPVNDDLVPAVVGNHLSMETLAG 279
PSN+YS G + +E+NL+L + +D VP G H+ + G
Sbjct: 513 PSNIYSAGIESQELNLTLYACGADQHDCYVPFEFGKHMRLSQFYG 557
>UniRef50_Q2TJF5 Cluster: Laminin alpha 4; n=9; Clupeocephala|Rep:
Laminin alpha 4 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1871
Score = 33.5 bits (73), Expect = 6.2
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -2
Query: 230 KSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYA---TMAGRGYLTPQSNQVLLFFRTYAP 60
K + ++ PR KL SQS Y FDG GYA + RG + + + + RT A
Sbjct: 1081 KMDVKASAPCPRHKLAFSQSRVTSYLFDGTGYALVNNIERRGKIGVVT-RFDIEVRTVAN 1139
Query: 59 NGLIYLL 39
NG+++L+
Sbjct: 1140 NGILFLM 1146
>UniRef50_Q82BJ6 Cluster: Putative protease; n=1; Streptomyces
avermitilis|Rep: Putative protease - Streptomyces
avermitilis
Length = 444
Score = 33.5 bits (73), Expect = 6.2
Identities = 26/109 (23%), Positives = 44/109 (40%)
Frame = -2
Query: 344 GIQNGYPYVVMDIGDSSEPGQDPARVSIDKWLPTTAGTKSSLTGNSTEPRDKLISSQSGP 165
G ++ P + +G + A S+D+ L ++ + + + G E I++
Sbjct: 320 GNESSRPQAIRPVGRPANCPSILAVASLDRALTVSSFSSAGINGQGGEVN---IAAPGRA 376
Query: 164 QEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLLKASVFEA 18
G GY +M+G TP VL APN LKAS+ +
Sbjct: 377 VHSAAPGGGYQSMSGTSMATPHVAGVLALLAQAAPNASAEDLKASLLSS 425
>UniRef50_Q16363 Cluster: Laminin subunit alpha-4 precursor; n=40;
Tetrapoda|Rep: Laminin subunit alpha-4 precursor - Homo
sapiens (Human)
Length = 1823
Score = 33.5 bits (73), Expect = 6.2
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 197 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 39
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091
>UniRef50_Q0GLE1 Cluster: Dof11; n=4; core eudicotyledons|Rep: Dof11
- Glycine max (Soybean)
Length = 285
Score = 33.1 bits (72), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 236 QRLSATTCQWRPSPDPGQVRSCPRCPSLHT 325
Q++S+ + + +P P P Q CPRC S +T
Sbjct: 9 QQMSSQSVEKKPKPHPEQALKCPRCDSTNT 38
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 879,256,968
Number of Sequences: 1657284
Number of extensions: 20197529
Number of successful extensions: 57908
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 54142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57735
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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