Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1283
         (795 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    31   0.041
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   2.7  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.6  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   8.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.2  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    23   8.2  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 31.1 bits (67), Expect = 0.041
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 254 WLPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMA 123
           W P   G +S + G  +E R KL+++ S P    FD R ++T A
Sbjct: 466 WSPVFMGGRSGILGRESENRRKLVTTVSTPV---FDRRNHSTRA 506


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 719 EMSTSTHVSAYFRTKEKDGFILYLGNPKGTML 624
           ++  + H+   F+ ++K   IL  GNPKGT++
Sbjct: 397 DVEQTIHLVEKFKKRKKLEEILNGGNPKGTLV 428


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 149 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATTC 259
           R  T  G T RR  +P+         TW + LS TTC
Sbjct: 116 RRWTRSGATGRRQPHPYRAGRV--GQTWQRLLSVTTC 150


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 149 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATTC 259
           R  T  G T RR  +P+         TW + LS TTC
Sbjct: 116 RRWTRSGATGRRQPHPYRAGRV--GQTWQRLLSVTTC 150


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 119 GQPSWHIHGHRTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATTCQW 265
           G P+ HIH  R  T+E   AR S   + L  +L+     Q  S+T  +W
Sbjct: 395 GSPTLHIHCRRGLTIE-TGARCSTAAFFL--FLARWFAQQITSSTDARW 440


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
 Frame = -2

Query: 554 YHITAYNKLITHS*VPH*I*PALYNTQ-----THTHFVTRAHHKNTHSHM*RTHNTSTQF 390
           Y    ++ L +H   PH + P + +T      TH+H     HH + H H    H T+   
Sbjct: 464 YFSGGFSSLHSHH-SPHHVSPGMGSTVNGASLTHSHHAHPHHHHHHHHH----HPTAADL 518

Query: 389 LIFH 378
             +H
Sbjct: 519 AGYH 522


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 339 SERIPVCSDGHRGQLRTWPG 280
           S+ +PVC  GH   L+ W G
Sbjct: 811 SDEVPVCEPGH---LKLWDG 827


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 628 MVPLGLPRYRMKPSFSFVRKYADTCVEVDISSTVSGRRGCNVDH 759
           ++P G P       F+ +  YAD  V  +    V+    CN  H
Sbjct: 589 LIPKGTPEGMQFDLFAMISNYADDTVNQEFDENVN----CNDSH 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 942,449
Number of Sequences: 2352
Number of extensions: 22051
Number of successful extensions: 119
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)