Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1283
(795 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 46 6e-05
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai... 46 6e-05
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 46 6e-05
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 46 6e-05
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 30 4.2
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB... 30 4.2
BT025811-1|ABF85711.1| 237|Drosophila melanogaster IP01956p pro... 29 7.3
AE014134-726|AAN10344.1| 618|Drosophila melanogaster CG17612-PB... 29 7.3
AE014134-725|AAF51023.1| 618|Drosophila melanogaster CG17612-PA... 29 7.3
AE013599-112|AAF57306.1| 237|Drosophila melanogaster CG14468-PA... 29 7.3
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -2
Query: 749 LQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKSVCLKII 591
L+ + P+ ++T T++S YFRT E GF+LYLGN T + V ++I+
Sbjct: 2683 LELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIV 2735
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 362 DDYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKWLPTTA---GTKSSLTGNSTEPRD 192
+D++ + I NGYP + +D+G+ E V+ +W G + LT P
Sbjct: 2727 NDFVAVEIVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMGPNAKLTIREELPNG 2786
Query: 191 KLIS-SQSG 168
++ S+SG
Sbjct: 2787 DVVEHSKSG 2795
>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
protein.
Length = 1951
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -2
Query: 749 LQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKSVCLKII 591
L+ + P+ ++T T++S YFRT E GF+LYLGN T + V ++I+
Sbjct: 922 LELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIV 974
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 362 DDYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKWLPTTA---GTKSSLTGNSTEPRD 192
+D++ + I NGYP + +D+G+ E V+ +W G + LT P
Sbjct: 966 NDFVAVEIVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMGPNAKLTIREELPNG 1025
Query: 191 KLIS-SQSG 168
++ S+SG
Sbjct: 1026 DVVEHSKSG 1034
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -2
Query: 749 LQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKSVCLKII 591
L+ + P+ ++T T++S YFRT E GF+LYLGN T + V ++I+
Sbjct: 2683 LELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIV 2735
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 362 DDYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKWLPTTA---GTKSSLTGNSTEPRD 192
+D++ + I NGYP + +D+G+ E V+ +W G + LT P
Sbjct: 2727 NDFVAVEIVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMGPNAKLTIREELPNG 2786
Query: 191 KLIS-SQSG 168
++ S+SG
Sbjct: 2787 DVVEHSKSG 2795
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -2
Query: 749 LQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKSVCLKII 591
L+ + P+ ++T T++S YFRT E GF+LYLGN T + V ++I+
Sbjct: 2683 LELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIV 2735
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 362 DDYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKWLPTTA---GTKSSLTGNSTEPRD 192
+D++ + I NGYP + +D+G+ E V+ +W G + LT P
Sbjct: 2727 NDFVAVEIVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMGPNAKLTIREELPNG 2786
Query: 191 KLIS-SQSG 168
++ S+SG
Sbjct: 2787 DVVEHSKSG 2795
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.9 bits (64), Expect = 4.2
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +2
Query: 269 PSPDPGQVR------SCPRCPSLHTGIRSECRSPCSRPKKR*CEILEIVLKCCECVTCVS 430
P+P+ G VR + +CPS H I ++C PC++ C + E +C + V C
Sbjct: 2118 PTPEQGCVRVPAPCLASNQCPSGHMCIGNQCNLPCTKTAS--CAVGE---RCYQQV-CRK 2171
Query: 431 VCFYDVRVLRSE 466
VC+ L E
Sbjct: 2172 VCYTSNNCLAGE 2183
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 278 DPGQVRSCPRCPSLHTGIRSECRSPCSR 361
DP + S CP+ + S CRSPC R
Sbjct: 2434 DPNECLSDADCPASASCQNSRCRSPCER 2461
>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
isoform B protein.
Length = 1209
Score = 29.9 bits (64), Expect = 4.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 314 MDIGDSSEPGQDPARVSIDKWLPTTAGTKSSLTGNSTEPRDK 189
MD GD + G+ A +D TTA K+ ++ ++TE K
Sbjct: 619 MDTGDGNSDGEKGAAAEVDLTTETTATAKTLVSSSTTEAMRK 660
>BT025811-1|ABF85711.1| 237|Drosophila melanogaster IP01956p
protein.
Length = 237
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 71 CGRREALD*IEASNNLGQPSWHIHGHRTCTLEGQTARRSIYPWVL 205
CGR +D AS+N P G + CT G TA+ S Y W +
Sbjct: 143 CGRSSVVDYQTASSNRTWPIGSCCGKQNCT--GCTAKLSQYLWTI 185
>AE014134-726|AAN10344.1| 618|Drosophila melanogaster CG17612-PB,
isoform B protein.
Length = 618
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 236 QRLSATTC-QWRPSPDPGQVRSCPRCP 313
+ +S+ C Q+ S PGQ+ CP+CP
Sbjct: 491 EHISSQVCVQFLRSKSPGQIFPCPKCP 517
>AE014134-725|AAF51023.1| 618|Drosophila melanogaster CG17612-PA,
isoform A protein.
Length = 618
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 236 QRLSATTC-QWRPSPDPGQVRSCPRCP 313
+ +S+ C Q+ S PGQ+ CP+CP
Sbjct: 491 EHISSQVCVQFLRSKSPGQIFPCPKCP 517
>AE013599-112|AAF57306.1| 237|Drosophila melanogaster CG14468-PA
protein.
Length = 237
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 71 CGRREALD*IEASNNLGQPSWHIHGHRTCTLEGQTARRSIYPWVL 205
CGR +D AS+N P G + CT G TA+ S Y W +
Sbjct: 143 CGRSSVVDYQTASSNRTWPIGSCCGKQNCT--GCTAKLSQYLWTI 185
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,330,863
Number of Sequences: 53049
Number of extensions: 988573
Number of successful extensions: 3190
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3170
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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