Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1282
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0137 + 917533-917814,918080-918352 32 0.42
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 31 0.73
07_01_0080 + 587674-588510 31 0.96
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 31 0.96
07_03_0890 - 22332768-22333382 31 1.3
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191... 31 1.3
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 30 1.7
04_01_0034 - 401208-402923 30 1.7
06_01_1176 + 10112257-10113126 30 2.2
02_01_0302 - 2021221-2023305 30 2.2
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993... 30 2.2
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 30 2.2
04_04_0760 - 27837170-27837328,27837441-27837504,27837812-278381... 29 2.9
04_04_0323 - 24392043-24393021,24393135-24393544 29 2.9
06_01_0011 + 162301-163218,163349-163987 29 3.9
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 29 3.9
04_04_1704 - 35481041-35481461,35481682-35481810,35482291-354823... 29 3.9
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 3.9
03_01_0092 - 731069-731434,731569-733080 29 3.9
05_04_0156 - 18598926-18599177 29 5.1
04_04_0433 + 25163111-25163471,25163943-25164154,25164420-251647... 29 5.1
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 29 5.1
02_03_0129 - 15559017-15559901 29 5.1
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 28 6.8
09_01_0013 - 355103-355435 28 6.8
07_03_1382 - 26170563-26170631,26171151-26171843 28 6.8
06_03_1037 - 27058002-27058082,27058856-27059041,27060033-270601... 28 6.8
05_05_0131 - 22600220-22600582,22600849-22601234,22601337-226015... 28 6.8
05_01_0055 - 390371-390457,390637-390715,390804-390856,390951-39... 28 6.8
01_01_0715 - 5542648-5543219,5543352-5543544 28 6.8
10_08_0115 + 14924463-14924939 28 9.0
09_06_0204 - 21559024-21559287,21559445-21559567,21559665-215597... 28 9.0
08_01_0709 + 6265949-6266452,6267697-6267786,6268257-6268402,626... 28 9.0
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 28 9.0
02_01_0381 - 2764331-2764342,2768966-2769907 28 9.0
01_07_0359 - 43042675-43042758,43042956-43043024,43043099-430431... 28 9.0
>05_01_0137 + 917533-917814,918080-918352
Length = 184
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = -2
Query: 612 TRLTAIPPAPFEETRADCGEGAPPPDPPTHS------LPEPASTKRSARFADYTL 466
T T+ PP P R+ C PPP PP + LP + RS+ +DY+L
Sbjct: 64 TTTTSPPPPPSFRRRSFCRRCTPPPPPPPAAGGGGVVLPAAEAIGRSSSSSDYSL 118
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = -2
Query: 600 AIPPAPFEETRADCGEGAPPPD---PPTHSLPEPA 505
A PP P +E GAPPP PP +P PA
Sbjct: 184 AAPPPPADEDGTSASAGAPPPQAPLPPPAPVPAPA 218
>07_01_0080 + 587674-588510
Length = 278
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 675 LTCVKHQFSA-TGVFPSCNGLGTRLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEPAST 499
LT ++ Q +A T P G G PP P + PPP PP P P T
Sbjct: 65 LTSLEQQGAASTSTPPRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPPPLFT 124
Query: 498 KRS 490
+RS
Sbjct: 125 RRS 127
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 594 PPAPFEE--TRADCGEGAPPPDPPTHSLPEP 508
PPA ++ + CG PPP PPT P P
Sbjct: 377 PPAVTQQQDVKTSCGPAVPPPPPPTPPPPPP 407
>07_03_0890 - 22332768-22333382
Length = 204
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 594 PPAPFEETRADCGEGAPPPDPPTHSLPEP 508
PP P E + + PPP PPT P P
Sbjct: 89 PPPPPERAVPEAADTPPPPPPPTAPTPTP 117
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 609 RLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEPAST 499
RL + PP P E T PPP PP ++PE A T
Sbjct: 71 RLGSPPPPPAEATPPP----PPPPPPPERAVPEAADT 103
>05_07_0146 +
28018236-28018580,28018670-28018777,28018984-28019148,
28019269-28019736,28019823-28019936,28020038-28020715
Length = 625
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -2
Query: 654 FSATGVFPSCNGLGTRLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEP 508
F A V P C+ ++A APF D + APPP P + + P+P
Sbjct: 459 FLARAVLP-CSSTVATISA--SAPFPTVTLDLTQTAPPPPPASSTQPQP 504
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -2
Query: 618 LGTRLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEPASTKRS 490
L + + + PP P PPP PPT P P RS
Sbjct: 30 LNSPIWSAPPPPARHRAPSPPRPPPPPPPPTQPAPPPPPPARS 72
>04_01_0034 - 401208-402923
Length = 571
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 600 AIPPAPFEETRADCGEGAPPP---DPPTHSLPEPASTKR 493
A PP P ++ RA PPP DPP + PA KR
Sbjct: 306 APPPPPPQQQRAKPSRPPPPPPPLDPPPRAAAPPAKCKR 344
>06_01_1176 + 10112257-10113126
Length = 289
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 594 PPAPF--EETRADCGEGAPPPDPPTHSLPEPAS 502
PPAP ++ A APPP PP+ +LP AS
Sbjct: 157 PPAPMFADQATAFASLFAPPPPPPSQALPAFAS 189
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = -2
Query: 669 CVKHQFSATGVFPSCNGLGTRLTAIPPAPFEETRADCGE-GAPPPDPPTHSLPEPAST 499
C K Q A P+ G R PPAP G PP PT S P P+S+
Sbjct: 375 CSKAQCQAASYTPTPGGSPGRGGQGPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSS 432
>02_01_0015 -
98311-98412,98635-98707,98830-98921,99139-99230,
99363-99432,99683-99781,100008-100093,100541-100655,
100853-100918,101064-101143,101226-101301,101915-102151,
102559-102590,102993-103047,103384-103498,104497-104579,
105182-105232,105740-105802,105945-106010,106144-106279,
106503-106591,106844-106964,107138-107340,107434-107820
Length = 862
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -2
Query: 633 PSCNGLGTRLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEPAS 502
P G G A PPAP R PPP P +S P S
Sbjct: 6 PPITGAGAGAAASPPAPSTLRRNPPRSARPPPTPLPNSKPSQIS 49
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 612 TRLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEPA 505
++L IPP P + CG A PP PP P PA
Sbjct: 267 SKLPPIPPPPPMPALSVCGRAAAPPPPPP---PPPA 299
>04_04_0760 -
27837170-27837328,27837441-27837504,27837812-27838160,
27838906-27838960,27839489-27839821
Length = 319
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -2
Query: 612 TRLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEPASTK 496
T T PP P + PPP PPT S P K
Sbjct: 5 TTTTPPPPPPPPSESTPTSDPKPPPPPPTSSTAAPKKRK 43
>04_04_0323 - 24392043-24393021,24393135-24393544
Length = 462
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = -2
Query: 618 LGTRLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEPASTKR 493
L TRL PP P EE A + P P PP+ P A KR
Sbjct: 180 LSTRLPTPPPPP-EEQDATIADSMPEP-PPSSPSPNRAKGKR 219
>06_01_0011 + 162301-163218,163349-163987
Length = 518
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 630 SCNGLGTRLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEPASTKRSAR 484
+C G+G + A+P F C + APPP P E A+ SAR
Sbjct: 452 ACPGMGLAMQAVPA--FLAALVQCFDWAPPPSQPLPLDMEEAAGLVSAR 498
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 594 PPAPFEETR--ADCGEGAPPPDPPTHSLPEPASTKRSAR 484
PP P + R A APPP PP P+P + K+S R
Sbjct: 128 PPRPHPDIRILAHAPPPAPPPPPPQ---PQPQAAKKSRR 163
>04_04_1704 -
35481041-35481461,35481682-35481810,35482291-35482397,
35482515-35482583,35482825-35482936,35483013-35483131,
35483211-35483291,35483629-35483700,35484039-35484239,
35484442-35484528,35485284-35485523,35485991-35486455,
35487434-35487556,35487643-35487769,35487851-35487919,
35488061-35488189,35488628-35488722,35488808-35488876,
35489332-35489443,35489545-35489663,35489753-35489833,
35490898-35490969,35491052-35491267,35491524-35491601,
35491694-35491831,35492403-35492414,35492639-35492872,
35493076-35493130,35493222-35493352,35493813-35494546,
35494613-35494820
Length = 1634
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -2
Query: 633 PSCNGLGTRLTAIPPA----PFEETRADCGEGAPPPDPPTHSLPEPASTKRSAR 484
P+ NGL RL + P + + PP PP PEPA K + R
Sbjct: 28 PTPNGLNDRLLRLTRTHQRGPSQNPNPNPNPNPKPPPPPPPQEPEPAKVKLAGR 81
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 594 PPAPFEETRADCGEGAPPPDPP-THSLPEP 508
PPAP + A G G PPP PP + P P
Sbjct: 335 PPAP-SPSAAGAGSGPPPPPPPAAPAAPRP 363
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 615 GTRLTAIPPAPFEETRADCGEGAPPPDPPTHSLPEP 508
G + A+PP P + T APPP P H P
Sbjct: 227 GQSIAAVPPPPLQPT--PVASAAPPPPPQHHHQQTP 260
>05_04_0156 - 18598926-18599177
Length = 83
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 567 ADCGEGAPPPDPPTHSLPEPASTKRSA 487
A G PPP PP S P P+S+ S+
Sbjct: 53 AVAGTYQPPPPPPARSSPPPSSSSSSS 79
>04_04_0433 +
25163111-25163471,25163943-25164154,25164420-25164701,
25164794-25164916,25165511-25165664,25165754-25165965,
25166143-25166212,25166294-25166424
Length = 514
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 546 PPPDPPTHSLPEPASTKRSARFA 478
PPP PP SLP A T S R A
Sbjct: 12 PPPPPPPASLPSTACTSSSRRRA 34
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 594 PPAPFEETRADCGEGAPPPDPPTHSLPEPASTK 496
PPAP E + + PPP PP P P K
Sbjct: 213 PPAPAPEPEPEPPKKEPPPPPPPKQEPCPPPPK 245
>02_03_0129 - 15559017-15559901
Length = 294
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 552 GAPPPDPPTHSLPEPASTKRSARFAD 475
GAPPP P S P P+ +K + +D
Sbjct: 183 GAPPPHPAKSSAPAPSPSKSKGKKSD 208
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = -2
Query: 609 RLTAIPPAPFEET---RADCGEGAPPPDPPTHSLPEPASTK 496
R A+P P +E PPP PP H+ P P TK
Sbjct: 128 RAQALPRGPGQEPPPPHVPKAAPPPPPPPPPHAPPGPPPTK 168
>09_01_0013 - 355103-355435
Length = 110
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 556 SAVGARLFERRWRDGGEPRAQPVARRKHARRRKLVLHTSQSG 681
+A G R + RWR PR +P RR +RR+ H+ + G
Sbjct: 32 AAGGRRAWRPRWRPQRRPRWRP-QRRLGQQRRRATWHSFRQG 72
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 594 PPAPFEETRADCGEGAPPPDPPTHSLPEPASTKRSAR 484
PP P + D E PPP PP + + +R+ R
Sbjct: 185 PPPPPPQPSGDANENPPPPPPPLRTGVGNSDGRRARR 221
>06_03_1037 -
27058002-27058082,27058856-27059041,27060033-27060176,
27060284-27061183
Length = 436
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 597 IPPAPFEETRADCGEGAPPPDPPTHSLP 514
+P F+ A+ PPP PP +LP
Sbjct: 114 VPAKLFDAPAAEASSSEPPPPPPPRTLP 141
>05_05_0131 -
22600220-22600582,22600849-22601234,22601337-22601526,
22601636-22601805,22601909-22602053
Length = 417
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 543 PPDPPTHSLPEPASTKRSARFADYT 469
PPDPP S+P PA + A +D++
Sbjct: 360 PPDPPAASVPAPAPSASPAPKSDHS 384
>05_01_0055 -
390371-390457,390637-390715,390804-390856,390951-391105,
391216-391422,391518-391658,392044-392202,392296-392476,
393153-393252,393321-393470,393581-393705,394006-394096,
394364-394472,394558-394657,395143-395307,395401-395506,
395590-395894,396003-396241,397036-397114,397189-397327,
398004-398054,398316-398770,398961-399158,399199-399261,
400212-400436,400706-400988,401109-401170
Length = 1368
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 251 SSAIAVLKSLSVDETVQASRRTRTACYPRSMP 156
+ IA L +++T+Q R C+PR +P
Sbjct: 749 TKVIATSPKLEIEQTIQTHRVPHLRCFPRPLP 780
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -2
Query: 615 GTRLTAIPPAPFEETRADCGEGAPPPDPP---THSLPEPA 505
GT TA P+P A G PPP PP + P PA
Sbjct: 167 GTNGTARAPSPPVPAPAPAGSPPPPPPPPAGGNFTAPSPA 206
>10_08_0115 + 14924463-14924939
Length = 158
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 618 LGTRLTAIPPAPFEETRADCGEGAPPPDPP 529
+G RL A P E+ D APPP PP
Sbjct: 81 IGVRLPATATPPPEDVAGDDMIDAPPPPPP 110
>09_06_0204 - 21559024-21559287,21559445-21559567,21559665-21559718,
21559800-21560721,21560803-21561212,21561284-21561408,
21561524-21561571,21561668-21561789,21562008-21562099,
21562242-21562429,21562582-21562696,21562780-21562863,
21562994-21563087,21563393-21563510,21563805-21563930,
21564002-21564074,21564209-21564296,21564674-21564744,
21564839-21564918,21565004-21565065,21565169-21565310,
21565410-21565510,21565600-21565644,21565725-21565789,
21566088-21566163,21566246-21566300,21566416-21566773
Length = 1366
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 329 FTLEVIRSSIKKGPLIALGKHGRGRDFVPKPDDFSSKPLQVSKCHKSV*SANRALL 496
F + S K L L +HG D +P D +S PL++ +V S N+ +L
Sbjct: 1107 FLVSCSSSLSSKFYLTYLWRHGPSADILPGKDFLASPPLKIKVMVCNVSSVNKMML 1162
>08_01_0709 +
6265949-6266452,6267697-6267786,6268257-6268402,
6268534-6268710,6268774-6268840,6268949-6269056,
6269718-6269732
Length = 368
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -2
Query: 600 AIPPAPFEETRADCGEGAPPPDPPTHSLPEPASTKRSARF 481
A P A F+ + P P PP P S R RF
Sbjct: 49 AAPDADFDSSEFALPPSGPTPPPPPQQARNPVSALRKLRF 88
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = -2
Query: 609 RLTAIPPAPFEETRADCGEGAPPPDPP-----THSLPEPASTKRSA 487
R + P+P + G APPP PP T PA+T SA
Sbjct: 321 RSRSASPSPSTSSSGSAGPPAPPPPPPPAAKRTSRTSTPATTSSSA 366
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 609 RLTAIPPAPFEETRADCGEGAPPPDPPTHSLP 514
RL PAP + A+ PPP PP + P
Sbjct: 42 RLRLSKPAPPSSSAAEAASDLPPPPPPPPNQP 73
>01_07_0359 -
43042675-43042758,43042956-43043024,43043099-43043159,
43043260-43043768,43044545-43045153,43045697-43045972,
43046581-43046769,43047006-43047116,43047621-43047908,
43047990-43048041,43048648-43048824,43049249-43049314,
43049675-43049929,43050071-43050577,43050807-43050886,
43050974-43051207
Length = 1188
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 594 PPAPFEETRADCGEGAPPPDPPTHS-LPEPASTKRSA 487
PP P ADC PP P TH+ P PA++ A
Sbjct: 38 PPEPLRRAVADC---LSPPAPHTHTHAPPPAASSAPA 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,215,556
Number of Sequences: 37544
Number of extensions: 401453
Number of successful extensions: 2809
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2715
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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