Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1280
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    27   0.19 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.76 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.3  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   7.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +3

Query: 648 VIGRGAFGEVR---LVQKKDTGHVYAMKILRKADMLEKEQVVTFEPN 779
           VIG GAFG VR   L  K+D     A+K+L+++   E+ +  T E N
Sbjct: 456 VIGEGAFGIVRRAFLDLKEDNKTQVAVKMLKESPTSEEIRQFTQEIN 502


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 5   LCNLCVLARQKSRYFTAVTYLTKVLFI 85
           LC+LC L  +K  Y    ++L    FI
Sbjct: 274 LCHLCFLLDEKLSYIILTSFLNNFYFI 300


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 74   PLLNKLRR*NNGISDELTHRDCTK 3
            PLL  L R    I D  +  DCTK
Sbjct: 982  PLLRSLNRGLGLIPDNPSREDCTK 1005


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 5   LCNLCVLARQKSRYFTAVTYLTKVLFI 85
           LC LC    ++  Y   +++ + +LFI
Sbjct: 276 LCRLCKRVDEEISYIVLMSFASDLLFI 302


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 5   LCNLCVLARQKSRYFTAVTYLTKVLFI 85
           LC LC    ++  Y   +++ + +LFI
Sbjct: 276 LCRLCKRVDEEISYIVLMSFASDLLFI 302


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 5   LCNLCVLARQKSRYFTAVTYLTKVLFI 85
           LC LC    ++  Y   +++ + +LFI
Sbjct: 276 LCRLCKRVDEEISYIVLMSFASDLLFI 302


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 232 FNRETAWNQFFLLGRI 185
           FN+   W+  FL GRI
Sbjct: 170 FNKIFGWSLIFLFGRI 185


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 730 GKPICWRK 753
           GKP CWR+
Sbjct: 881 GKPTCWRE 888


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 5   LCNLCVLARQKSRYFTAVTY 64
           +CN C    ++SR F  VT+
Sbjct: 286 ICNQCYNTVEESRIFGLVTF 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,153
Number of Sequences: 336
Number of extensions: 4265
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)